PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03169.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 388aa    MW: 43814.3 Da    PI: 11.0653
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03169.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.47.5e-1216229115128
                           NAM  15 vveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat...gkrknrat 78 
                                   +  yL+kkv+g +    l  +  +++ d++++ P  L +          + +++ ++ yfF+k++   ++    +r+ + t
  Zmw_sc03169.1.g00010.1.am.mk 162 LATYLRKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQQFYFFTKARFIGNKlnmRSRTIKNT 242
                                   568*********98755333345**************74467777666432335557788888775554410133444433 PP

                           NAM  79 k.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                     + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zmw_sc03169.1.g00010.1.am.mk 243 GdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 291
                                   34778*********965...67899999****66555515799*******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.644148307IPR003441NAC domain
PfamPF023652.4E-7162290IPR003441NAC domain
SuperFamilySSF1019412.88E-17163307IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MRDLVRRLGW RGIKKFSPEL TDFGRRTAGG PRLRKLGKLR NQLVPEREDE NRCARELEQW  60
REQLLARSEG QRRLGGGGLR RRRREVKEAG RTGERGRRKE RPGKGAHGES SNTLPSKIDR  120
PAPAPRAPNR HHHPRSAAGA PTRRRRGRSR WQQWTTRSPS ALATYLRKKV DGADVFSDLA  180
NAAYFHDEDV CSARPDVLVR AHTIPARVPS REAGDGQQFY FFTKARFIGN KLNMRSRTIK  240
NTGDKETWHA EGSAKPVDGT ADGYMTKLSY HVKTGPKTVE KPGWIMTEYS FKDTKEGDLV  300
LCKIYKSPRG PGRSKAPSLP AMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE  360
RSQLTQDMPA NSNSNSALED IDWSWFMP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545