PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02980.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 445aa    MW: 46634.6 Da    PI: 10.9751
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02980.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP111.99e-352814448126
                           TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasns 85 
                                    +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a ++    +++ssssa+ +
  Zmw_sc02980.1.g00070.1.am.mk 281 GKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAVFVsssAPSTSSSSAHYQ 361
                                   49********************************************************99998444222233333333322 PP

                           TCP  86 ssg..........................................kaaksaakskksqksaasalnlakesrakararare 124
                                   +++                                          +  +++a++   +  +a++lnl +  +a a  ra+e
  Zmw_sc02980.1.g00070.1.am.mk 362 QQQtvlgkrpreesdatvsvaaaasafwaalptsvprsteaswgfSPLEAQATTTYVPMAQAHHLNLIAALSAGAARRAEE 442
                                   222344555555566666666666666666666666666666666444444433333333444566666666666666666 PP

                           TCP 125 rt 126
                                   +t
  Zmw_sc02980.1.g00070.1.am.mk 443 ET 444
                                   65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.8E-30280367IPR005333Transcription factor, TCP
PROSITE profilePS5136927.009281335IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MSTVAAPSFP LVVSSLHGVS DHKSPTVTLT ANEFSVTDGN DAVRMGDPIQ LYAESELATQ  60
TRTLSKTRKA TLVARPFAPP FQHRSSSEAV SLFRYDNGSQ PHRQRRPLAR AVDFIIPDAG  120
VSPSVGRSRH SVVTPPGLPC SRLTAATQPC VQPCTRPSRP GDGPPRGPGP HARRQPLTPK  180
SGGASCTAPR VDVHSSGMQL GGMPSPATIW ISPLSNATRQ PTGAMATRDV STAAAAAAAA  240
SMFHVYQPWQ VPSTAVTAAA TDGALAVPAT TPGKKKASQG GKDRHSKVNG RGRRVRMPIV  300
CAARVFQLTR ELGLKSDGQT IEWLLRQAEP SILAATGSGT TPAVFVSSSA PSTSSSSAHY  360
QQQQTVLGKR PREESDATVS VAAAASAFWA ALPTSVPRST EASWGFSPLE AQATTTYVPM  420
AQAHHLNLIA ALSAGAARRA EEETR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100