PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02951.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 313aa    MW: 33715.3 Da    PI: 9.3354
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02951.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.32.6e-52131411128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79 
                                   lppGfrFhP+d+elv++yL++kv+g+  ++ ++  + +vd+++vePwdLp++++ + +ewyfFs +d+kyatg+r+nrat 
  Zmw_sc02951.1.g00090.1.am.mk  13 LPPGFRFHPRDDELVCDYLAPKVAGRVgFSGSRPpMVDVDLNRVEPWDLPAAASVGPTEWYFFSLKDRKYATGQRTNRATV 93 
                                   79***********************9986665666***************88888999*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   sgyWkatgkd++v + +g+lvg++ktLvfy+grapkg+kt+Wvmheyr+
  Zmw_sc02951.1.g00090.1.am.mk  94 SGYWKATGKDRPVAR-RGALVGMRKTLVFYQGRAPKGRKTEWVMHEYRM 141
                                   **************9.999****************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.15E-594165IPR003441NAC domain
PROSITE profilePS5100556.16413165IPR003441NAC domain
PfamPF023652.1E-2714141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MSASFLSMVE AGLPPGFRFH PRDDELVCDY LAPKVAGRVG FSGSRPPMVD VDLNRVEPWD  60
LPAAASVGPT EWYFFSLKDR KYATGQRTNR ATVSGYWKAT GKDRPVARRG ALVGMRKTLV  120
FYQGRAPKGR KTEWVMHEYR MEGHEQSPKL AAKEEDWVLC RVICKKKSAG GGATTKPARG  180
FATNGYDTAT TTSPPPPALM DTTLAQLQAA MNTKGAGAGA IEQVPCFSSF NNIASNSVSA  240
ANAAQQCYLP VATSSNGMSY LDHGLTDLGS CFDPLNSDKK WLKAVLSQVG GAVMHSPPPD  300
VAAAASSTWM NHF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-501016812171Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805880.11e-177NAC domain-containing protein 21/22-like
SwissprotQ84TE65e-79NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLA0A2T7EJ771e-176A0A2T7EJ77_9POAL; Uncharacterized protein
STRINGSi022747m1e-158(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP100223144
Publications ? help Back to Top
  1. Le Hénanff G, et al.
    Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
    J. Exp. Bot., 2013. 64(16): p. 4877-93
    [PMID:24043850]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  4. Huo X,Wang C,Teng Y,Liu X
    Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
    BMC Plant Biol., 2015. 15: p. 266
    [PMID:26530097]
  5. Chen X, et al.
    Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
    Plant Physiol., 2016. 170(4): p. 2136-45
    [PMID:26850273]
  6. Liu C,Wang B,Li Z,Peng Z,Zhang J
    TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
    Plant Physiol., 2018. 176(1): p. 742-756
    [PMID:29122985]