PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02951.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 777aa    MW: 84111.2 Da    PI: 6.8089
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02951.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.26.2e-078541763
                                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                    A r+R++ ++e  +L++   +L+a Nk L +e+++l+k+v++l +++
  Zmw_sc02951.1.g00010.1.sm.mkhc  8 AGRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVDDN 54
                                    679*************************************9997765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd146862.10E-51048No hitNo description
PROSITE profilePS5084827.39797297IPR002913START domain
Gene3DG3DSA:3.30.530.208.8E-23105289IPR023393START-like domain
SMARTSM002343.2E-43106316IPR002913START domain
PfamPF018526.6E-50107314IPR002913START domain
SuperFamilySSF559618.79E-35107317No hitNo description
SuperFamilySSF559617.42E-5354440No hitNo description
SuperFamilySSF559617.42E-5468540No hitNo description
PfamPF086705.0E-35641776IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    Send to blast
TEHCLLDAGR CREKQRKESS RLQTVNRKLS AMNKLLMEEN DRLQKQVSRL VDDNGCMRNQ  60
LHKASAAITD TSCESVVTSG QHHLQQNQPV LHPLQRDANN PAGLLAIAEE TLTEFMSKAT  120
GTAVNWVQMV GMKPGPDSTG IIAVSHNCSG VAARACGLVS LEPAKVAEIL KDRASWYRDC  180
RRVDILHVIP TGNGGTIELI YMQTYAPTTL AEPRDFWTIR YTSGLDDGSL VICERSLTKS  240
TGGPCGPNSP NFTRAELFPS GYLIRPCEGG GSMIYIVDHV DLNARSVPEV LRPLYKSPKI  300
LAQKMTVAAM RHIRQIALES SVEIPYSAGR QPAVLRTICQ RLSRGFNDAV SGFSDDGWSL  360
LSSEGSEDIT ISVKSCPSKL DGFCVSTSPF FSAIGGGIMC AKASMLIQNV PPALLVRFLR  420
EHRSQWADPG VDAYSASSLR TSQYTIPGLR GGGFIGGQAT VPLAETIDHE ESLEIVKLEG  480
NGFGHDDVLP RDMLLLQLCS GVDESAPGAC AQLVFAPIDG SFTDDAPLLP SGFRVIPLDG  540
KADAPSATHT LDLASSLEVG SGGALHVSKG TPSVGNVRSV LTIAFQFSFE NHLRESVAAM  600
ARQYIRAVMA SVQRVAMAIS PSRIGLQMEM KHPPGSPEAQ TLARWISRSY RVHTGTEIRW  660
SDNKGTESPL ELLWKHSDAA SPMLMFANSA GLDILETTLI NIQDMPLEAV LGDKGQKALF  720
LELPNIMNKG FASLPRGVCK SSMGRQASYE QAVVWKVLGD DGAPHCLALM LVNWTFI
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002443548.10.0homeobox-leucine zipper protein HOX33
SwissprotA2ZMN90.0HOX33_ORYSI; Homeobox-leucine zipper protein HOX33
SwissprotQ2QM960.0HOX33_ORYSJ; Homeobox-leucine zipper protein HOX33
TrEMBLC5YRY30.0C5YRY3_SORBI; Uncharacterized protein
STRINGSb08g021350.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37438197
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Itoh J,Hibara K,Sato Y,Nagato Y
    Developmental role and auxin responsiveness of Class III homeodomain leucine zipper gene family members in rice.
    Plant Physiol., 2008. 147(4): p. 1960-75
    [PMID:18567825]
  3. Luan W, et al.
    Knockdown of OsHox33, a member of the class III homeodomain-leucine zipper gene family, accelerates leaf senescence in rice.
    Sci China Life Sci, 2013. 56(12): p. 1113-23
    [PMID:24302292]