PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02923.1.g00060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 262aa    MW: 27669.7 Da    PI: 6.587
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02923.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.4e-10220253538
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                                   kr +r   NR +A+rsR RK+++i eLe+ v +L
  Zmw_sc02923.1.g00060.1.am.mk 220 KRVKRILANRQSAQRSRVRKLQYISELERSVTTL 253
                                   8999**************************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.646218262IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.34E-9220256No hitNo description
PfamPF001701.5E-8220254IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10220254No hitNo description
CDDcd147035.46E-20221254No hitNo description
PROSITE patternPS000360223238IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MLHHQAPTSP AVPRALSTDG SLAGCDVMRS SLAGSGCPHV PKVSSHVTLQ FPFLSIALRS  60
FSRPPHKPAT QPKPHIMAQL PPRIPTAVHH WQEGGHHGAG ASAWADDFAE FAASRRGAHR  120
RSLSDSVAFV EVAPADGGAG EFDRLDDDQL MSMFPDEGGS ASAPGSENSG SDSDGDKRAA  180
AAAGEERDDE RNGDAAKEPA PGQDAAAAVA APTELIGDPK RVKRILANRQ SAQRSRVRKL  240
QYISELERSV TTLQIDPTNI LS
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969997.13e-80basic leucine zipper 6
SwissprotQ5JMK62e-60BZP06_ORYSJ; Basic leucine zipper 6
TrEMBLA0A0A9PQJ53e-84A0A0A9PQJ5_ARUDO; Uncharacterized protein
STRINGSi002546m1e-79(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]