PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02847.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 417aa    MW: 44988.2 Da    PI: 9.2381
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02847.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.77.7e-22852185128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra.. 77 
                                   f+ hP+d elv+ yL++ v++       + i+evd+y++ P +L +      ++ +e  wyf s+ + k+++g+rk r+  
  Zmw_sc02847.1.g00070.1.am.mk  85 FHSHPSDLELVKSYLRPWVDSGLKAGGGAfIHEVDVYSAAPASLTRefapaVAQDGECAWYFLSPLRAKSKRGRRKARTvg 165
                                   6679***************99886555555**************844677444445559*******************634 PP

                           NAM  78 tksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   t +g W++  k k+v++   +++ vg ++++ f  ++  + ++t W+m e rl
  Zmw_sc02847.1.g00070.1.am.mk 166 TGEGCWHSEAKFKPVVDGldDRRRVGFRQSFSFMIKDGAQRTRTGWLMLELRL 218
                                   7799************98888899**********99999999******99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100530.97581240IPR003441NAC domain
SuperFamilySSF1019418.63E-3085240IPR003441NAC domain
PfamPF023655.8E-1385218IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MTEPDGRVIL ARQTPSRACR ARVGDPADSD SKSNRFSSCR FRAVVIGPAA SKIATASPPP  60
SLPSMVRSPS TPPPNQKPAS PCAPFHSHPS DLELVKSYLR PWVDSGLKAG GGAFIHEVDV  120
YSAAPASLTR EFAPAVAQDG ECAWYFLSPL RAKSKRGRRK ARTVGTGEGC WHSEAKFKPV  180
VDGLDDRRRV GFRQSFSFMI KDGAQRTRTG WLMLELRLAA EGDDEEASAG NIVLCKVYRS  240
PRHPGEDLPP AARKRTADDD KSNASPRSVG KADEDEGSNV TAGRRKSDGQ GYSAANVAVP  300
RNTDDEVRET NAAALAPGRK ENEAEDDNES AEISANTPGR KRKAADGKTS IATSPAQPAR  360
SKRKTDRELH CPQCGYHLDA EAVLAAAKTI SETKSETGIV QIKGDSLVKD HTFHQFF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969524.22e-92protein ATAF2
TrEMBLA0A368R9326e-91A0A368R932_SETIT; Uncharacterized protein
TrEMBLK3XIX72e-91K3XIX7_SETIT; Uncharacterized protein
STRINGSi001850m3e-92(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972