PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02841.1.g00110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 286aa    MW: 30571.9 Da    PI: 6.5198
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02841.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-194090256
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Zmw_sc02841.1.g00110.1.sm.mk 40 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 90
                                  59******9.**********955...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.23E-313999No hitNo description
PROSITE profilePS5103222.9984097IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-324099IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-234098IPR016177DNA-binding domain
SMARTSM003805.9E-3840103IPR001471AP2/ERF domain
PRINTSPR003673.7E-114152IPR001471AP2/ERF domain
PfamPF008471.4E-124190IPR001471AP2/ERF domain
PRINTSPR003673.7E-116379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MLLRYWSEAL NLSPRGFRGG AVPPALFQHL LRAQQAPPKL YRGVRQRHWG KWVAEIRLPR  60
NRTRLWLGTF DTAEDAAMAY DREAFKLRGE NARLNFPDLY LGKGRVGGSG RTSASAAASC  120
SSSSSSAPPT PDEIRAKQAQ EHHGEEPPAS NSEATPLLPE ADEAKNSKPQ TNSQAQAADQ  180
QSGDGNTAMF QPPVASSGSG VWGPADEAWF SAWGPGSSVW DYDMDNAHGL FLQSRFASES  240
TGMEYASSAQ DVPMTPAPAA GPAMAAASSS LPPPGPPPLP HSPTYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-203697163ATERF1
3gcc_A1e-203697163ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809849.11e-138ethylene-responsive transcription factor ERF054-like
TrEMBLA0A3L6QK781e-139A0A3L6QK78_PANMI; Uncharacterized protein
STRINGSi019997m1e-137(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268