PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02826.1.g00110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 341aa    MW: 36146.4 Da    PI: 7.5393
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02826.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.85.4e-14273323555
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                     +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++Nk+L  + ee+k+ 
  Zmw_sc02826.1.g00110.1.sm.mkhc 273 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNKELERKQEEMKES 323
                                     79*************************************999888888765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-11269337IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.553271323IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-10273322No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-14273323No hitNo description
PfamPF001705.5E-12273323IPR004827Basic-leucine zipper domain
CDDcd147071.99E-25273325No hitNo description
PROSITE patternPS000360276291IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEFKSGRSSS QRRPSSAADG APVANQGSVY SLTFDELQST LGGAAAGGSG VGKDFSSMNM  60
DELLRNIWTA EETHAMASTS TAGPGAPPAP LQRQSSSLTL PRTLSTKTVD EVWRNLVRDE  120
PQEGAVAGAG QQTQRQSTLG EMTLEEFLVK AGVVRENPAP VLPPMPPPSR PVPVAPKSAT  180
AFGNFPGADD AAAATLGFAP VGMGNLTLGN GLMPRATGMG AGALAAQIAV SQLDSGVKGN  240
GDLSSPTETL PYSFGGMISG RRNGGGVEKV VERRQRRMIK NRESAARSRA RKQAYTMELE  300
AEVQKLKEQN KELERKQEEM KESQKNESRD MEQATERDGN I
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802824.11e-136bZIP transcription factor TRAB1-like
SwissprotQ6ZDF32e-97TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLA0A2S3H0261e-135A0A2S3H026_9POAL; Uncharacterized protein
TrEMBLA0A2T7ET331e-135A0A2T7ET33_9POAL; Uncharacterized protein
STRINGPavir.Ba02029.1.p1e-135(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Publications ? help Back to Top
  1. Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
    Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
    Plant Cell, 2002. 14(12): p. 3177-89
    [PMID:12468735]
  2. Kobayashi Y, et al.
    Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J., 2005. 44(6): p. 939-49
    [PMID:16359387]
  3. Kobayashi F,Maeta E,Terashima A,Takumi S
    Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
    Physiol Plant, 2008. 134(1): p. 74-86
    [PMID:18433415]