PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02802.1.g00120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 313aa    MW: 32622.6 Da    PI: 4.3136
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02802.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-1897147155
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa  ++ a+ +l+g
  Zmw_sc02802.1.g00120.1.am.mk  97 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAAWVYDSAAIQLRG 147
                                   69********.**********88.....55*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.1E-1197147IPR001471AP2/ERF domain
CDDcd000182.01E-2797154No hitNo description
SMARTSM003806.3E-3298161IPR001471AP2/ERF domain
PROSITE profilePS5103222.5198155IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-2198155IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-2898155IPR001471AP2/ERF domain
PRINTSPR003671.3E-999110IPR001471AP2/ERF domain
PRINTSPR003671.3E-9121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MSRSRTVRIF WDDPDVTDSS GEEDAYGARK VGRLVRELPP VEAAAAAAAA AAGMLEQSSA  60
GDGERGRRPA AGGLGGCSGG ARRRLGSKGA GSVAPGTKFR GVRRRPWGKY AAEIRDPWRG  120
VRVWLGTFDT AEEAAWVYDS AAIQLRGPNA TTNFSSAAAA DSGGSGGGHQ DQVPAGYESG  180
TESLPAVSSP TSVLRKVPSL SSLAEDKDES DAATGEPAAE CSLAALEELG EFVPFEDAPV  240
YASSSGFWDF EPDAAGFLYA EPSSPETAWD VAAATTSASS GDASWPAPSV HQENDYFQDL  300
RDLFPLNPLP AIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1989163580Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006644464.11e-130PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLJ3L2I61e-128J3L2I6_ORYBR; Uncharacterized protein
STRINGOB01G34420.11e-129(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697