PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02773.1.g00110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 473aa    MW: 51511.8 Da    PI: 7.3935
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02773.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.8e-08159184227
                                     XXXCHHHCHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkae 27 
                                      +lk  rr+++NReAAr+sR+RKk e
  Zmw_sc02773.1.g00110.1.sm.mkhc 159 TQLKTIRRLAQNREAARKSRLRKKLE 184
                                     5799*******************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-4155187No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
PfamPF141446.8E-28237310IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MGETSSSTSH PRQDPCVLGS YGFHGAMGNN SAPPASFFDQ EGTTYFGELE EALMHQVATF  60
GTQHAVDAST AHHGHLHNST SSFHAAATAA AAATVTARPP PTLDIFPSWP MRSLDTPKAG  120
SNVTADSTDS ASSSKNTSNH SSDQHGAAAN MASPQQQQTQ LKTIRRLAQN REAARKSRLR  180
KKLESSKVKL AQMEQDIQRA RAQGLLLGGA PGANTSSGAA MFDLEYARWL EDYGRRMAEL  240
HGALHAHLPD GELRAIVDDT LTHHDELCRL KAQAARSDVF HLITGVWVSP AERCYLWMGG  300
FRPSDLLKTL LPQLDPLTEQ QVVGICNLQQ SSQQAEEALS QGLEQLHQSL ASTMAGGSVT  360
DDPNTSFMSQ MAHALNKLSN LEGFVIQADN LRQQTLHQMH RILTVRQAAR CFLAIGEYHN  420
RLRALSSLWA SRPREILVTD EGNCGELSMV QKTLGPSKAL VKGQMLRLEV TRK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828229.10.0transcription factor TGAL4-like isoform X1
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A2S3ICM00.0A0A2S3ICM0_9POAL; Uncharacterized protein
STRINGSb05g003240.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]