PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02754.1.g00040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 610aa    MW: 65185.8 Da    PI: 8.8849
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02754.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.14.4e-293805101107
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk................kvka....eekewyf 60 
                                   lppGfrF+Ptdeel+v+yL++++ +++l+++  i++++i+ ++P+dL p                 +       +e e yf
  Zmw_sc02754.1.g00040.1.am.mk 380 LPPGFRFRPTDEELIVHYLRRRAFASPLPAAVDIPDIRILAHDPSDLlPPgelseaslaerslqaaH--RrggwNEPERYF 458
                                   79***************************9666**************63246899999888765431..1333355588** PP

                           NAM  61 FskrdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLv 107
                                   F++++ ky +g+r+nrat +gyWkatgk+k+v ++     +  lvg+k++L+
  Zmw_sc02754.1.g00040.1.am.mk 459 FTCKEAKYVKGRRANRATGAGYWKATGKEKPVAVAapggnQAVLVGMKRSLA 510
                                   ********************************99888765555699999985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-30376525IPR003441NAC domain
PROSITE profilePS5100527.086380548IPR003441NAC domain
PfamPF023656.1E-16381519IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    Send to blast
MRAAAFPGAA SALNPLLVSL LREPRPAATR TAAVSTSSDH MSELLCCKYK ILLQWLLCCL  60
RLSMLALILL AAASLRLAKE GCDDTALSCL FSSEITTLMP VLASAIDELR RLAPPSPATV  120
ESPRRLSGSS AMEAVRSRYS LISARSPFNE HSSSVSSAKL MAAKEKESIS STLGHRSSTY  180
RSLQSICKID QLFSDDAFAH LGVIASVLWS SHSLSPGAFL EAPLPSLNLK LRYAMKSGAG  240
MNPAVSGKGG GDVTGRPSPS SVPISLALAR SSAAPASSAA ETEQHEKELM RSQTEENGRE  300
KRRGPQCCTS ASLPKPVSPE PGPARQWKPS NNRQAGDQAG AAAIANKFLC QVSPRSTERS  360
ILDLASFPAM DAKEVVRRRL PPGFRFRPTD EELIVHYLRR RAFASPLPAA VDIPDIRILA  420
HDPSDLLPPG ELSEASLAER SLQAAHRRGG WNEPERYFFT CKEAKYVKGR RANRATGAGY  480
WKATGKEKPV AVAAPGGNQA VLVGMKRSLA SRADEGWVLC RVFRKRGSSA SDGTAPAEAD  540
ADADADERGA EEEGEGDDAA PASGFIDFFA RADRQRRRRA SSPVVTVSSS CLTDASHECR  600
DQDTTSGGCA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-2038052615169Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1572578DRQRRRR