PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02738.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 252aa    MW: 27032.2 Da    PI: 4.7879
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02738.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-1691140355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  Zmw_sc02738.1.g00020.1.am.mk  91 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 140
                                   57******.**********32..2.24***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.3E-3090154IPR001471AP2/ERF domain
PROSITE profilePS5103221.64190148IPR001471AP2/ERF domain
PRINTSPR003671.8E-891102IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2191150IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.9E-2891149IPR001471AP2/ERF domain
CDDcd000183.89E-1491125No hitNo description
PfamPF008472.3E-1291140IPR001471AP2/ERF domain
PRINTSPR003671.8E-8114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEQEKHSAPA AAEAASDAPL PFDTTDIDDD TVLQLEAILL GTDTDSTVPC SDMSTSSELE  60
DGRGSSAATN DHLQRPHPGY SQVPKQPPAA FIGVRKRPWG KFAAEIRDST RKGARVWLGT  120
FDTPEAAALA YDQAAFSARG AAAVLNFPLE CVRESLAAMA LTAGSSPILA LKRRHSKRTR  180
RRKVPPVSDR SKDPTPPACR RSDESAVLGS TVEVPQQQAT APCPFDCSVN VVELEELGAD  240
YLDELLWMSS GI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-25911511575Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay act as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:11950980}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Weakly induced by Pseudomonas syringae tomato (avirulent avrRpt2 strain), but also by mock inoculation. {ECO:0000269|PubMed:11950980}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979115.12e-54ethylene-responsive transcription factor ERF094
SwissprotQ8VYM02e-38ERF93_ARATH; Ethylene-responsive transcription factor 15
TrEMBLA0A2T7CMG42e-54A0A2T7CMG4_9POAL; Uncharacterized protein
STRINGPavir.Hb01336.1.p2e-53(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2868035
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang H, et al.
    Arabidopsis AtERF15 positively regulates immunity against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea.
    Front Plant Sci, 2015. 6: p. 686
    [PMID:26388886]