PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02707.1.g00130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 197aa    MW: 19920.8 Da    PI: 5.5658
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02707.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP50.96.1e-164523788
                             TCP 37 deLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88
                                    +eLG+++d++t++WLlqqa+pai ++tgt++++as+    +s+ s  +++++
  Zmw_sc02707.1.g00130.1.am.mkhc  4 KELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASAL---ASVPSLPSPNAA 52
                                    59*******************************9665...444444433333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136912.453129IPR017887Transcription factor TCP subgroup
PfamPF036346.2E-125171IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MDPKELGHKS DGETVQWLLQ QAEPAIVAAT GTGTIPASAL ASVPSLPSPN AALARPHHHH  60
MWAPPAASAG FSSAGFLNSA AGGADAAGIG GLMQRMGLPA GLDMSGGGAA GGHIGFAPMF  120
AGHAAAGVPG LELGLSQDGH IGVLAPQSLS QFYHHVGAAG GSGQLQHPHQ RHQHQHQQQE  180
DGEDEREDAE SDEESGQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002456872.17e-73transcription factor TCP20
TrEMBLA0A0A8YXQ08e-79A0A0A8YXQ0_ARUDO; Uncharacterized protein
STRINGSb03g044320.13e-72(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28643269