PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02679.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 545aa    MW: 58927.9 Da    PI: 11.3145
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02679.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.32.9e-27752201128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                                   lppGfrF+Ptdeelvv+yL++k+ g +l++  vi+ v d+y ++Pwd+p    a++ e yfF+ r  ++ + + ++ +t  
  Zmw_sc02679.1.g00030.1.am.mk  75 LPPGFRFKPTDEELVVQYLRRKAFGAPLPA-AVIPVVrDLYGLDPWDIP---GASDGEKYFFAIRPAASGHVELPRGKTGg 151
                                   79****************************.8899999***********...3467899******9998855444444323 PP

                           NAM  80 .......sgyWkatgkdkevlsk.....kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                                          sg+Wk  gk ++v+       ++ lvg+++ L+f         k+ ap g  + Wvmheyrl
  Zmw_sc02679.1.g00030.1.am.mk 152 sggatpaSGRWKPDGKGRPVVLPrpcggGSLLVGVRRALAFAprrgkkntKQAAPAGLMAGWVMHEYRL 220
                                   33333459*************99899877777**********9988877767899999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-3669248IPR003441NAC domain
PROSITE profilePS5100541.3175248IPR003441NAC domain
PfamPF023653.7E-1776220IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MAEESRKNTS ELAPDLLDRL AKIMPVKQDA HRQLAALRSL SERKLRAELP SSPADLSVME  60
RVPVLVRHAG GVATLPPGFR FKPTDEELVV QYLRRKAFGA PLPAAVIPVV RDLYGLDPWD  120
IPGASDGEKY FFAIRPAASG HVELPRGKTG GSGGATPASG RWKPDGKGRP VVLPRPCGGG  180
SLLVGVRRAL AFAPRRGKKN TKQAAPAGLM AGWVMHEYRL AAALLHKNGC SSAETAEGEW  240
VVCRVFRKSR QQQQPRRRDQ AVPAGDGTVP RRTQPSLSAA SSASCVTDGS DQDDEFSSVC  300
SAGIYGRQPL APRFPQSRKL HLWSLTRRSR RCAACRTCVW RAARSPRDRD GFVKPPPPPS  360
SPRSIAVVFT RDDGDARIRC KERSIGHSAD LTATWVDGNQ LRGAGGSKAR KETSYQTPIG  420
SDLQQRPISP CVDRSTDGSR SFHSEVFRSP TQALSGHRRV AVRRPRAAGV PVARGENPGR  480
IPVAWTQIAA GCREVWDRRA SSGHASPASA IGYLQINAHD RPGAVSGRGR STLSWSWAVA  540
RGLDG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-23672547174Stress-induced transcription factor NAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118183140