PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02639.1.g00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 827aa    MW: 88208 Da    PI: 10.9842
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02639.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.47.5e-363595318135
                           TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...seceaesssssasns 85 
                                    ++ h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a   s++ +++ssssa+ +
  Zmw_sc02639.1.g00150.1.am.mk 359 GKDQHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvfvSSSAPSTSSSSAHYQ 439
                                   4899******************************************************88888444222333333333322 PP

                           TCP  86 ssg..........................................kaaksaakskksqksaasalnlakesrakararare 124
                                   +++                                          +  +++a++   +  +a++lnl +  +a a  ra+e
  Zmw_sc02639.1.g00150.1.am.mk 440 QQQtvlgkrpreesdatvsvaaaasafwaalptsaprsteaswgfSPLEAQATTTYVPMAQAHHLNLIAALSAGAARRAEE 520
                                   222456777888889999999999999999999999999999998666666655555555556899999999********* PP

                           TCP 125 rtrekmriknk 135
                                   +tre m i++ 
  Zmw_sc02639.1.g00150.1.am.mk 521 ETRETMGIRTA 531
                                   ******99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.4E-29358445IPR005333Transcription factor, TCP
PROSITE profilePS5136925.747359413IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 827 aa     Download sequence    Send to blast
MSTVAAPSFP LVVSSLHGVS DHKSPTVTLT ANEFRTGSER DMPLLANEAA GTDFCRQGDP  60
IQLYAESELA TQTRTLSKTR KATLVARPFT PPFQHRSSSP ISMADLRFLP NAGVSPSVGR  120
SRHSVVTPPG LPCSRLPAAT QPCVQPCTRP SRPGDGPPRG LGPHPRRPPL TPKSGGASCT  180
APRVDVHSSG MQLGGMPSPA TTCPSSAPHH PVSVARELFH RFRPVLHAKS LIIRCPCDAQ  240
HDRGELAGKT GGSLRSGQVA VPAQSICFTA GRALSRLRST GPHLHLSPLQ SSPSPATRQR  300
QPTGAMATRD VSTAAAAAAM FHVYQPLQVP STAVTAAATD GALVVPATTP GKKKASQGGK  360
DQHSKVNGRG RRVRMPIVCA ARVFQLTREL GLKSDGQTIE WLLRQAEPSI LAATGSGTTP  420
AVFVSSSAPS TSSSSAHYQQ QQTVLGKRPR EESDATVSVA AAASAFWAAL PTSAPRSTEA  480
SWGFSPLEAQ ATTTYVPMAQ AHHLNLIAAL SAGAARRAEE ETRETMGIRT AGEQITAMID  540
TGESQSNSIS PRRSLFLHDT SLSLCSEGKG KCGKRLRRLH PHSSLAAARP PASENFASAN  600
EERSRPLRLR LRTRTVRFVR VKAQVLRTLH QGRWHVSLCR TFSCYLDHVL LPLTEDEDLV  660
CGAALSCSPC RAPARLLTTK PAYVHRPAGA RARASMDTTT PSDEAESFGA RDRDETGRSP  720
PVLGAGSSEH GTARCPVRFA LPGWRPVPYL CRASSCLPAS SDFVREPRLD PATTSRRKNT  780
LPSRHGTARR GAVLGASLEC RAEQVAVADS QLHRRPRAAV DNRRCVY
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100