PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02565.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 390aa    MW: 43874.7 Da    PI: 6.7923
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02565.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-1180109433
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                                      k err+ +NReAAr+sR+RKka++++Le+
  Zmw_sc02565.1.g00020.1.sm.mkhc  80 AKTERRLVQNREAARKSRLRKKAYVQQLET 109
                                     799*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-777153IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.16379123IPR004827Basic-leucine zipper domain
PfamPF001701.9E-880110IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-881125No hitNo description
SuperFamilySSF579592.49E-781124No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
PfamPF141445.5E-29161236IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MSQMELVSPA SSALRQEVMM VTTDDYSYSY RPGLAAAAPP PPAPAAAPSF QQQPMQQLHG  60
GEHDKRKHGS ARKDGKSVDA KTERRLVQNR EAARKSRLRK KAYVQQLETS RIRLQQVEHE  120
LQRARSQGLF VGGCSAAGDM SSGAAMFELE YARWLDDDSK QLEELRGGLQ AQLLDGNLGL  180
IVEECMQHYD ELFQLKAELA RSDVFHLLTG IWATPAERCF FWMGGFRPSE LLKILMQQLD  240
PMTEQQMMGI CNLQQSSEQA EEALAQGLHQ LHQSLADTVA AGTLNDGVVT PNYMNLMALA  300
LEKLASLESF YQQADNLRQQ TLHQMRRILT TRQAARCFLS IGEYYRRLRA LSNLWASRAR  360
ENFNGTESIS PTATELQAML QQQQNQFSGF
Functional Description ? help Back to Top
Source Description
UniProtRequired for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001104893.10.0transcription factor LG2
RefseqXP_008673408.10.0transcription factor LG2 isoform X2
SwissprotO490670.0LG2_MAIZE; Transcription factor LG2
TrEMBLA0A2T8IJA50.0A0A2T8IJA5_9POAL; Uncharacterized protein
STRINGGRMZM2G060216_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Publications ? help Back to Top
  1. Walsh J,Freeling M
    The liguleless2 gene of maize functions during the transition from the vegetative to the reproductive shoot apex.
    Plant J., 1999. 19(4): p. 489-95
    [PMID:10504571]
  2. Schnable PS, et al.
    The B73 maize genome: complexity, diversity, and dynamics.
    Science, 2009. 326(5956): p. 1112-5
    [PMID:19965430]