PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02503.1.g00120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NF-X1
Protein Properties Length: 178aa    MW: 19787.2 Da    PI: 8.9702
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02503.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X119.12.9e-064362119
                        zf-NF-X1  1 CGkHkCqklCHeGpCpp.Cp 19
                                    CG+H+C + CH+GpC   C+
  Zmw_sc02503.1.g00120.1.sm.mkhc 43 CGRHRCPERCHRGPCNDtCR 62
                                    ***************88886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd060081.29E-113382No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MGETVGNAHF EVVALVHVGR KIIQECDAEA ATCGSTCEKV LGCGRHRCPE RCHRGPCNDT  60
CRLVVTKSCR CGGLKKEVPC GTEKNQKPPK CSKKCNIPRL CRHKLECRVN ARCSCNTLKQ  120
EWICQDVLKE YRKLGRDPKE VPKNQFGVGL LACGGDCIKK VKVPDSELHL RKSQVNKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968270.12e-35PREDICTED: NF-X1-type zinc finger protein NFXL2
SwissprotQ9FFK82e-21NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
TrEMBLM7ZK644e-37M7ZK64_TRIUA; NF-X1-type zinc finger protein NFXL2
STRINGSi000223m6e-35(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP107733537