PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02292.1.g00170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 337aa    MW: 36139.5 Da    PI: 11.0532
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02292.1.g00170.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-19153203155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr ++ +gr++AeIrdp     r +r++lg+f+tae Aa+a++aa++ ++g
  Zmw_sc02292.1.g00170.1.am.mk 153 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDAAALHFRG 203
                                   689*******.**********8...2.35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.45E-18153213No hitNo description
PfamPF008474.0E-13153203IPR001471AP2/ERF domain
PROSITE profilePS5103224.54154211IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-22154212IPR016177DNA-binding domain
SMARTSM003805.0E-35154217IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-31154212IPR001471AP2/ERF domain
PRINTSPR003673.0E-10155166IPR001471AP2/ERF domain
PRINTSPR003673.0E-10177193IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MNPPTTRETT ERPTDRPSKV LHRQKKTEEQ RKLAEPNAGA APPPVHLHVT APHHRRGQPR  60
VPLALRRRPP HLLICPPPHL LICPPPSLSL PKPTQCRDQT TTERARTLGA RQRPAPSVAT  120
WWSRSLFPSF VASMAPKTAP PPAAAVSDGM MEPRFRGVRK RPWGRYAAEI RDPARKARVW  180
LGTFDTAEAA ARAYDAAALH FRGPKAKTNF PVAYAQAKHA LAPPKALAVS PSSSTIESSS  240
RESPVAAPAP ASSLDLSLGM PVVVAAQPFM FLDPRLAVTV AVPAPAPLRP VAVAAHKAAT  300
YRDDEQSDTG SSSSVVDASP AVGLGLDLNM PPPDEVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-19149214975Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823499.11e-80ethylene-responsive transcription factor 4-like
TrEMBLA0A2T8IDR95e-80A0A2T8IDR9_9POAL; Uncharacterized protein
STRINGPavir.Ga00485.1.p5e-81(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118532537