PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02264.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1073aa    MW: 113465 Da    PI: 10.9298
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02264.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-18826876256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                    y+GVr+++ +g+WvAeIr p++   r+r +lg+f++ae+Aa a+++ + kl+ge
  Zmw_sc02264.1.g00020.1.am.mk 826 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDSAEDAAMAYDREAFKLRGE 876
                                   59******9.**********955...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.61E-29825884No hitNo description
PROSITE profilePS5103222.787826883IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-22826885IPR016177DNA-binding domain
SMARTSM003807.5E-38826889IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.2E-31826884IPR001471AP2/ERF domain
PfamPF008472.2E-11827876IPR001471AP2/ERF domain
PRINTSPR003671.5E-9827838IPR001471AP2/ERF domain
PRINTSPR003671.5E-9849865IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1073 aa     Download sequence    Send to blast
MKVERARDAA TLQLALAATG HACGFTARSR PANGRSATGG TAQGREGLPT DMLPSQNSRI  60
GREENPPESA ESHHPYALYC RVNFNAEGPK CHQREGGCVH RTASVLKTGR VVFVPERKGI  120
LNWLAYATPI HCLETTAGLF WSPGRVALVA VGQALPYLNL VLTSSRRPKL ALASTSRGGS  180
SLLAYEDAHG SIIDSFLCGV HVDVLRASGR PQPKSSRHSQ KRAHTASSGK VNALPAPPAY  240
VATADRSERA RNRSALGSTA PTATARAGRL CARGCAVAAT STTQTIQCRK GSGCGRTGRP  300
RTPSCLTAVA GEGGWAVSAP VSFPSSLATP TDVGFCNAIV DFVGSGLGVE EEAKISGASS  360
WSRPFAGRRK RCHAGAEVRV MLPKGEVRSM PLRRPISSFS SYLIGKNMEL SPALGGHTSR  420
IRRTPITVVA SNHIVLGGGG GYRRTAALRL RIGCRNRAGV RSYGRRPESV DVDDIYFVRS  480
YAKGGITQAQ ALLLPGWLTA TGNTPLRFVH AMTCRDQGIT TVTGSCGAGH RPGIVSLAHS  540
AASAPHFFFL SSPNAVMLWH QKQNATTRTP APRAASGRLP ADRFITGSSF ASPRSKLASA  600
SVSLRALAIA SIELEMEGSS GSSDSSGGGT GGAGGRGRRW KGKDITPIQP RRQLAPVIEE  660
ASVASLRPLR KIGRPSDRLQ RSASSLSKYS SSSSAPPSPR SSAISSSAPS GRYIFPFAYE  720
PSTPAGGPLP AWQQSSSASQ PASPQQQKPR PSLQRQGQQM ISFGAPPPQY EAQLLRPESA  780
QQQQQMLRYW SEALNLSPRG GQAGGGVLPS LYQHLMRAPP PPPQKLYRGV RQRHWGKWVA  840
EIRLPRNRTR LWLGTFDSAE DAAMAYDREA FKLRGENARL NFPDRFLGKG RAGGSGRTSA  900
SSAAASAALG AGLSSPSPSP PKTPEEASMQ QTTALRRAGG SVDKQTTQPL VAASSAQEGS  960
SSDMAMPHSA EMFHAPMASG SDWGPADEAW FSTWGPGSSL WDYDMDSARG LFLHGRFATD  1020
EAGMERSNAQ ETTATNAAAT GTDMACDHVP PVTPASSSPT HSQTPPDTSN FKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-19825885465ATERF1
3gcc_A4e-19825885465ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268