PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02246.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 331aa    MW: 36735.3 Da    PI: 9.3488
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02246.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42e-104787545
                                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                                    k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Zmw_sc02246.1.g00090.1.sm.mkhc 47 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 87
                                    788*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-83790No hitNo description
SMARTSM003381.7E-743106IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384589IPR004827Basic-leucine zipper domain
PfamPF001705.6E-74787IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-74790No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141446.9E-34129204IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MMADASPRTD TSTDDTDENH LIVVGQGALG AASDSSDRSK DKHGDQKTLR RLAQNREAAR  60
KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIFISSS VDQSQSKSGN GALAFDMEYA  120
RWLEEHNRQI SELRAGVSAH ASDTDLRSVV DKIMSHYDEI FRLKGNAAKA DVFHVLSGMW  180
KTPAERCFLW LGGFRPSEVL KLLSTQLEPL TDQQLSGISS LQQSSQQAED ALSQGMEALQ  240
QSLAETLAGS LSSSGSTGNV ANYMGQMAMA MGKLGTLENF LRQADNLRLQ TLQQLQRILT  300
TRQSARAFLV ISDYSSRLRA LSSLWLARPK E
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002457410.10.0transcription factor TGA2.3 isoform X1
RefseqXP_021312815.10.0transcription factor TGA2.3 isoform X1
RefseqXP_021312816.10.0transcription factor TGA2.3 isoform X1
SwissprotP239230.0HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLC5XQR10.0C5XQR1_SORBI; Uncharacterized protein
STRINGSb03g006790.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]