PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02110.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 285aa    MW: 30554.7 Da    PI: 6.5213
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02110.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.61e-21182244163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
  Zmw_sc02110.1.g00050.1.sm.mkhc 182 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIRKEYEQLLSQN 244
                                     89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.2E-28197IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.0E-9108164No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-17179243No hitNo description
PfamPF001704.7E-20182244IPR004827Basic-leucine zipper domain
SMARTSM003387.2E-21182246IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288184247IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-11185242No hitNo description
CDDcd147024.09E-24187237No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGSNDPGTPS KTSKASEQDQ PPATTSGTTA SVYPDWTPFQ AYSAMPPHGF FPPPVAANSQ  60
AHPYMWGAQP MVPPYGTPPP PYVMYPPGTV YAHPSTPPGA APGAPEMNGG SQNGSSYSAS  120
QGMVNQGMSM LPIQPGAMVG VPGSTTNLNI GMDYWAASGS AAVPAMHSKV PAGSARGDQW  180
DERELKKQKR KQSNRESARR SRLRKQAECE ELGQRAESLR SENSSLRAEL ERIRKEYEQL  240
LSQNASLKER LGGTSNLVPD MNEQNDGDGS SKKQPDSDAQ SEHEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198204RRSRLRK
2198205RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004952026.11e-162transcription factor HBP-1a
SwissprotP239228e-74HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLK3YTP11e-160K3YTP1_SETIT; Uncharacterized protein
STRINGSi017637m1e-161(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]
  2. Tabata T, et al.
    A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif.
    Science, 1989. 245(4921): p. 965-7
    [PMID:2772648]
  3. Mikami K, et al.
    Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants.
    Mol. Gen. Genet., 1995. 248(5): p. 573-82
    [PMID:7476857]
  4. Nakayama T,Okanami M,Meshi T,Iwabuchi M
    Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain.
    Mol. Gen. Genet., 1997. 253(5): p. 553-61
    [PMID:9065688]
  5. Okanami M,Meshi T,Tamai H,Iwabuchi M
    HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain.
    Genes Cells, 1996. 1(1): p. 87-99
    [PMID:9078369]