PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01936.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 131aa    MW: 14027.3 Da    PI: 4.5643
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01936.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57369.95e-2267131263
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKk 63 
                                   lfqrlw++eDeiv+L+++ +f+a++g+   +++ d++ fye ++++++  ++ksqlveK+rrLK+
  Zmw_sc01936.1.g00010.1.am.mk  67 LFQRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKR 131
                                   79*************************9977778******************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-1768131IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MVDDPSAAGA GVMISSFPDA DAYGNGDSED IDFAGDPNSH ASFSAAPATA PASAGAGGSG  60
SGERRALFQR LWTDEDEIVI LRAFAEFTAQ RGTAFASHQY DTTPFYEDMR GRLQTGFTKS  120
QLVEKLRRLK R
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001142743.12e-55uncharacterized protein LOC100275086
SwissprotQ9CAV78e-20STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A1E5VM576e-55A0A1E5VM57_9POAL; Uncharacterized protein
STRINGPavir.Ib01769.1.p5e-58(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123