PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01905.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 313aa    MW: 33412.6 Da    PI: 4.3427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01905.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1880129255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+W+AeIrdp+    +  r++lg++ +ae Aa+a++aa++ ++g
  Zmw_sc01905.1.g00070.1.sm.mk  80 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTYSSAEAAARAYDAAARDIRG 129
                                   69*******.**********75....44**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.18E-1879139No hitNo description
PROSITE profilePS5103224.69880137IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-2280138IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-3180138IPR001471AP2/ERF domain
SMARTSM003806.5E-3880143IPR001471AP2/ERF domain
PfamPF008474.9E-1280129IPR001471AP2/ERF domain
PRINTSPR003672.3E-108192IPR001471AP2/ERF domain
PRINTSPR003672.3E-10103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MCGGAILAEL IPSAPARRAK RQQRKADDFE EAFRDFDDDS EDDAEMAKAE AEEVAESMPF  60
VVRAAPSANR HGGGRRKPAQ YRGVRRRPWG KWAAEIRDPV KGVRVWLGTY SSAEAAARAY  120
DAAARDIRGS RAKLNFPETS SSASDSAPAG RKRARAVPAA PVIDLVFDEV EEDHAASVKH  180
EAEASQGSDE SGHALLPDFS WQGVLALDFA VAQPALDVEP AGAGKRMRTE ETPAERAGDE  240
EASPASSESD ALFDAFLFCD QYPFFGGGGG GAYESLDSLF SADAVQGGSA ADEGMGLWSF  300
DDGCLLVEDN LSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-2077142268ATERF1
3gcc_A5e-2077142268ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17486RRKPAQYRGVRRR
2149155GRKRARA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797880.13e-94ethylene-responsive transcription factor ERF073-like
TrEMBLA0A2T7CGR12e-93A0A2T7CGR1_9POAL; Uncharacterized protein
STRINGPavir.Ia04158.1.p3e-85(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43712654