PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01882.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 454aa    MW: 48869.8 Da    PI: 9.8146
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01882.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57385.85.7e-27169263297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 
                                   +fqr+wse+De+ +LqGl+ +   +g     d++ fy+ +++s+   +++sql+eK+rrLK+Kf+ +++++++g +p+  +
  Zmw_sc01882.1.g00020.1.am.mk 169 NFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKFRSMSARVANGLDPARLA 248
                                   79*******************.556878888************************************************** PP

                        DUF573  83 ehdqkifelskkiWg 97 
                                   +hd+++++l++++W+
  Zmw_sc01882.1.g00020.1.am.mk 249 PHDRDVLHLCSRLWD 263
                                   **************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.9E-24170263IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MEAGCRWEGV MSRIRNPRIP AEPTKPPRCD PSTRATQLYA IGLHHPYRVP SPSSPNPQAA  60
ATPSGHAARD PIHPPASHAT SPSRLVLVAP RGLASPARSP GSVRAMASHQ QTLPVPVPVS  120
PNPTAPADPT PPSSGARKLP IKRRSPRPST SSPRSSGSNQ QQQEQPPFNF QRIWSESDEL  180
RFLQGLLGCG AQGLVFPRDL NVFYDRFSES MPQPYTRSQL SEKLRRLKNK FRSMSARVAN  240
GLDPARLAPH DRDVLHLCSR LWDPANAATS PFAAGTGTGA SGNKRRRANP RGTPLLAPDA  300
SGDSNSHDFN GISFPGGSNG EDMFFIEQES GHLGNHEGAP LVADSTFSGI ALEQSQTVAS  360
VPIENHGIVN EMNGNHKLVV PCSNEQCMAN AVLDVFDECL REAKANGNLS SGNAQGSADG  420
SELAKRWRAQ RIDELLVLSR RLRLLVEDAT VAGR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002464013.11e-162probable transcription factor At3g04930
RefseqXP_021307245.11e-162probable transcription factor At3g04930
TrEMBLB6T7U51e-163B6T7U5_MAIZE; Uncharacterized protein
STRINGSb01g010570.11e-162(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86953243