PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01866.1.g00120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 462aa    MW: 51654.8 Da    PI: 6.7205
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01866.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.7e-09168190325
                                     XXCHHHCHHHHHHHHHHHHHHHH CS
                          bZIP_1   3 elkrerrkqkNReAArrsRqRKk 25 
                                     ++k err+++NReAAr+sR+RKk
  Zmw_sc01866.1.g00120.1.sm.mkhc 168 DDKTERRLAQNREAARKSRLRKK 190
                                     589*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.1E-7168236No hitNo description
PROSITE patternPS000360173188IPR004827Basic-leucine zipper domain
PfamPF141441.4E-29224299IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MDPFSLHPYR HTSDLHFQEL QPSDTACFGE LEKALVHGTR DTSMIGSDVH AKAAGYLAAR  60
PPPTLEIFPS WPMSHLQQQY SGNSQSVGSS SGSSSGQNTM PQAELVSPWS TRADSGHQHE  120
ALMVSVDDYN YGQGFGATAA TAPIFQQHTA GQDKRRHEST RKDGKLLDDK TERRLAQNRE  180
AARKSRLRKK GLFLGGCSGT GDMSSGAIMF DMEYARWLDD ESKHLTELQG ALQAQLIDAN  240
LGVIVEDCMR HYDELFHLRA VLARSDVFHL MTGMWATTAE RCFLWMGGFR PSEILKMLIP  300
QLDPLTEQQL LGMCNLRQSS EQTEEALVQG LQQLHQSLAD AVGAGPLDDG ASLTNYTGLM  360
ALALDKLDSL ESFYRQADNL RQQALHHMRR ILTTRQTARC FLSIGEYHRR LRALSSAWTS  420
RPRENFVATE NVSPTGTDQA ILHHQHQHQQ QQHHNQSQFS GF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961926.10.0transcription factor TGAL5 isoform X1
RefseqXP_022680634.10.0transcription factor TGAL5 isoform X1
SwissprotQ6F2N00.0TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBLA0A368QHY50.0A0A368QHY5_SETIT; Uncharacterized protein
STRINGOMERI05G15000.10.0(Oryza meridionalis)
STRINGOS05T0443900-010.0(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]