PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01866.1.g00060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 177aa    MW: 19366.2 Da    PI: 4.5447
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01866.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.95.2e-16454150
                           NAM  1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkk 50
                                  lppGfrF Pt+eelv++yL+ k++g++  ++e+vi+ +d++ ++Pw+Lp +
  Zmw_sc01866.1.g00060.1.sm.mk  4 LPPGFRFYPTEEELVCFYLRSKLDGRRrDDIERVIPVADVCALDPWQLPGT 54
                                  79***********************996667778**************942 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-17255IPR003441NAC domain
PROSITE profilePS5100512.7914154IPR003441NAC domain
PfamPF023651.3E-7574IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MAELPPGFRF YPTEEELVCF YLRSKLDGRR RDDIERVIPV ADVCALDPWQ LPGTSSNISI  60
WMQAMIRSEF SLCRLYTESG HPRQFDSRPR AAAAAAGGGG ENHLIPSSST AALFTSVEET  120
TGRKRKRSPQ NDDTSSSNDG DGGHGHSPQQ LSAQGAGTED GGLVDGTDDW AEFLDWF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158910.19e-25LOW QUALITY PROTEIN: NAC domain-containing protein 90-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2914433