PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01752.1.g00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 180aa    MW: 19011.6 Da    PI: 10.436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01752.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.43.5e-131046142
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeA 42
                                  ++y+GVr ++ +gr++AeIrdp +   r+r++lg+f++  eA
  Zmw_sc01752.1.g00150.1.am.mk 10 PRYRGVRKRP-WGRFAAEIRDPAK---RARVWLGTFDS-AEA 46
                                  68********.**********843...6**********.555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-81046IPR001471AP2/ERF domain
CDDcd000182.01E-211067No hitNo description
SMARTSM003803.2E-221171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-221165IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-141166IPR016177DNA-binding domain
PROSITE profilePS5103216.1991165IPR001471AP2/ERF domain
PRINTSPR003675.1E-81223IPR001471AP2/ERF domain
PRINTSPR003675.1E-83450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009737Biological Processresponse to abscisic acid
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MCDTAAVAAP RYRGVRKRPW GRFAAEIRDP AKRARVWLGT FDSAEAXXXX AARNLRGPLA  60
RTNFPVVPRL PLTSSRPRGL VVAPAQATAP TCSSSSTVES SSGPRVGPKT AAAPRKRVVV  120
VLPRPAAPDV GCHSDCASST SVMDDGDDAS TVRSRVPFDL NLAPSMDGDL DAGTDLRLCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-151266361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-151266664ATERF1
3gcc_A3e-151266664ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00366DAPTransfer from AT3G20310Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822790.12e-49ethylene-responsive transcription factor 7-like
TrEMBLA0A0A8Y8Q65e-65A0A0A8Y8Q6_ARUDO; Uncharacterized protein
STRINGPavir.Ga00187.1.p1e-54(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51232758