PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01675.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 676aa    MW: 71581 Da    PI: 8.8254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01675.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.22e-085045312855
                           AP2  28 rkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++r++lg+f tae+Aa+a+++a++ + g
  Zmw_sc01675.1.g00020.1.am.mk 504 KTRIWLGTFETAEDAARAYDEAARIMCG 531
                                   48*********************98765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.05462539IPR001471AP2/ERF domain
SMARTSM003801.1E-14497545IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-19497540IPR001471AP2/ERF domain
CDDcd000185.19E-16499539No hitNo description
SuperFamilySSF541711.37E-11500540IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    Send to blast
MVRASDLHVK EGEESQVGTI VAAERKKRRR RDNPSCVKRH TSGRCGLYSG HSAQLDRPPN  60
SKLQTPNRVM EKPWTALLRS KGFMHLAQCV AAVVVVVIVT LRTSLSWRAE IIPRSHGGFR  120
VLSGVPPSLP AFAGGPFART CRGQGVDDHG ACLQASVYAV TDESLPGSVF QCDPEIPEWY  180
KPNEPSLPYL GAADLKTEGD ESPRPGLFHL FKEAARQKWV LPAPALTQLD VAPTTVCAAL  240
GMASASIRSA LGRSYPTLIQ AWAPRRIACD DEDDKCVACS AAHARSHRTH AHQSLSSQDW  300
TTTCVAPVMS AHGSSSLRVE GVALLPKAAL EVGAPVGNVT AEASPPWPRL HPEARRHMCR  360
VALGPGRLAY GTFVDRAPDV GAVDAACVPS VVKPGDSTLP AGAFPRHVTR WCDRISDDSV  420
ERARALVSGA RQPSRSRARS QEAEVSSVAG RVQITGAASR SIAVGVPDNG AGAATVPRRA  480
AAPLGLLGLR DPPPPPVRRQ AATKTRIWLG TFETAEDAAR AYDEAARIMC GPRARTNFPS  540
DAAASAAAAS SSSSFLSAAL VEKLHRFNLA SVQVAQXXXX NFPSDAAASA AAASSSSSFL  600
SAALVEKLHR FNLASVQVAQ RQREAAAAAA ASASAAATAP SPSAVQWGGG TFLEEQHVEQ  660
MIEELLDSNF SMEICY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12430RKKRRRR
22431RKKRRRRD
32530KKRRRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2846422