PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01639.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 696aa    MW: 72889 Da    PI: 11.1408
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01639.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.25.7e-11490514226
                       G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                                   pr+rWt++LH+rFv+ave LGG+e+
  Zmw_sc01639.1.g00010.1.am.mk 490 PRMRWTSTLHARFVHAVEVLGGHER 514
                                   9*********************997 PP

2G2-like37.36.1e-125555792751
                       G2-like  27 AtPktilelmkvkgLtlehvkSHLQ 51 
                                   AtPk++lelm+vk+Ltl+hvkSHLQ
  Zmw_sc01639.1.g00010.1.am.mk 555 ATPKSVLELMDVKDLTLAHVKSHLQ 579
                                   9************************ PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.3E-22488514IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.3E-22555579IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-7555579IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MLVHGLGSRH IAGRWPVSIE ATKRSNGIQF PSLKRKSLHS NQAADRGASI RRQRQRQFMS  60
AAAAQLLVND ASSLITALIM PGGGGAAVSS WSKPRSSLCL PGGMGNGTGL KLAATVNLLH  120
VSTWTHSGGV KLGSLCPCGH VPKDKRKKKN GIDGAINPVD SKVAGCRLLR ETHGKPARSY  180
MATETAAVRS CERSMVQAQL LELPDTHFPF HPSLPYLSKG RGSSPLAPRR RERGAASMEA  240
TASAPDLSLH ISLPSGNAAS PSSAPGLGAG GVVGGRGAAG SPGGDPWRRL NGSTASTELS  300
LSPPQRQQEG AASALPWRLR PSTAANAPSS SSSASSAEAA AFLPVTVPRL SLDAAASAEA  360
ARGRPINGVP VYSSPGAGSS PFLGAGDYRQ RQPKVGLYNP YPSSAWPSSL RSTTAAVPAP  420
VDTTTAAFHH SPSAYHRMLS GTGRLHLHGA LADTLRSYGA GHQQYFGSSL ASSRYVPRFP  480
AASRRGMRAP RMRWTSTLHA RFVHAVEVLG GHEREWSPPA GQFRGNLGSF HARVTRSAKL  540
LRLISLSPYV HGPGATPKSV LELMDVKDLT LAHVKSHLQA SELSPLAQQL KLNARERKPG  600
VLVHLRLSRL TMQAAAIPRE SEEGEPRPID GGGSGDDDLP NAEQAQSAGD LNRQPFAGLG  660
RSASSEGATS QFGGGDVECS SADDSDGSRV RSTSSR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820100.11e-106probable transcription factor RL9 isoform X2
TrEMBLA0A3L6RKZ81e-113A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p1e-116(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787