PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01586.1.g00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 408aa    MW: 43773.7 Da    PI: 11.0347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01586.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.2e-06367392630
                                     HHHHHHHHHHHHHHHHHHHCTSCC.C CS
                             HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                                     +++Er RR ri +++ +L+el+P+ +
  Zmw_sc01586.1.g00150.1.sm.mkhc 367 SIAERERRTRISEKLRKLQELVPNmD 392
                                     689********************966 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.559361408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-6364396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.74E-4365398No hitNo description
Gene3DG3DSA:4.10.280.103.1E-5366395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MPASFHLQRG TSDPTSLVEP GGSPRRATRP ENQSRAIALP QSLSFAPSPA RLGSFKPTTR  60
PRSSHLRQQP PPQPNLPCFY ASRAHQQPKL TSSRPGAHRA RLPGRRLVNF TPAQRPEGAV  120
GMRRFMPGSG GVEPSSSPSS GGQQRHHQHG ERGGDTAAAG GLRYGGGDIS LGHGHDGRLP  180
QLGVDSAGRN EDRQQDGSMD MLARHSSSPV GFFSNLVMDN GYPSSKGAGG SGAEPHHHPS  240
KASNVNSWKM NFTRQQQQQG AASGHLSQIS ELDGGAFPPG LSAGGRSSGE SSGAASRSFS  300
GGFSIVGPWE ESREITATLG AYDPQFSGAM AGSALEMAGM DRYLQLQQDQ VPFKVRAKRG  360
CATHPRSIAE RERRTRISEK LRKLQELVPN MDKTLKHEQE KCTCCRKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808991.11e-104transcription factor bHLH128-like
TrEMBLA0A1E5USQ61e-106A0A1E5USQ6_9POAL; Transcription factor bHLH128
STRINGPavir.Aa01423.1.p1e-102(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115313141