PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01518.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 462aa    MW: 50841.5 Da    PI: 8.2002
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01518.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.72e-311072691128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatg 71 
                                   lp+G++F+Ptd+el+ e+L++kv+  +        ++++   i+   +i++++P++Lp  ++++  + ++F++ +k+y+tg
  Zmw_sc01518.1.g00090.1.am.mk 107 LPAGVKFDPTDQELI-EHLEAKVRPGTgaapshplIDEFIPtIEGEdGICYTHPEKLP-GLTKDGLSRHYFHRPSKAYTTG 185
                                   799************.99******999888886553333334776646**********.455566789************* PP

                           NAM  72 krknra..........................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmh 124
                                   +rk+r+                           ++ +W++tgk+++v++  g++ g+kk+Lv+y   g+++k++kt+Wvmh
  Zmw_sc01518.1.g00090.1.am.mk 186 TRKRRKiqpptaatssssspaaqhqqqqqqqkRSETRWHKTGKTRPVVV-AGHQRGCKKILVLYtnFGKHRKPQKTNWVMH 265
                                   *****88********************9998755789************.9999**********5547999999******* PP

                           NAM 125 eyrl 128
                                   +y+l
  Zmw_sc01518.1.g00090.1.am.mk 266 QYHL 269
                                   **98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-3499192IPR003441NAC domain
PROSITE profilePS5100528.059107288IPR003441NAC domain
PfamPF023657.3E-15108269IPR003441NAC domain
SuperFamilySSF1019411.31E-34219288IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MFTMSTQYNL PVEQAERSLA SASRLRRVQL PYPPIHDRNP ALIRVGKGFS GNLGGEGEEL  60
EATMDGGAST AATSGGNLQE QRKYMSESSC CPRCGHKINR LLDWVGLPAG VKFDPTDQEL  120
IEHLEAKVRP GTGAAPSHPL IDEFIPTIEG EDGICYTHPE KLPGLTKDGL SRHYFHRPSK  180
AYTTGTRKRR KIQPPTAATS SSSSPAAQHQ QQQQQQKRSE TRWHKTGKTR PVVVAGHQRG  240
CKKILVLYTN FGKHRKPQKT NWVMHQYHLG EAEEEREGEL VVSKIFYQTQ PRQCGAAEPS  300
AASSAATVEM SDQAAAVPVA TSSSSAGVAF QGAVGIDEFN FAQFRSSQVQ ARDDDQEVHA  360
GQHHHLQQEH DLRHPYANQE QQRMAAAAAA AFHIRTPTDP ITALITPPPL LHHGRRPAGF  420
WTGRGDYGLH FKEGHGNGSG SKASADWQYP SFWPPDNQDH DG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966092.11e-167uncharacterized protein LOC101753253
TrEMBLA0A368QXL41e-166A0A368QXL4_SETIT; Uncharacterized protein
STRINGSi006435m1e-165(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117