PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01458.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 384aa    MW: 41882.7 Da    PI: 4.7254
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01458.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.84e-14121475128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat.gkrk 74 
                                   f F P+d  lv + L++k+ g +++ +  + + d+++v P++L +          + +++ ++ yfFs+++  +++ +k++
  Zmw_sc01458.1.g00050.1.am.mk  12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDDDVCSVRPEELVRkhskparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 
                                   89*********.88*********999888**************73367777554322225568899999876655313333 PP

                           NAM  75 nra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   +r+      +  W+  g+ k v     ++ g  + + f+ k   ++  k  W+m ey+l
  Zmw_sc01458.1.g00050.1.am.mk  92 KRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147
                                   343232133567*****9877754...567888889999444667777*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.1558163IPR003441NAC domain
PfamPF023652.7E-1012147IPR003441NAC domain
SuperFamilySSF1019419.55E-2012163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MDAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSKP  60
ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS TAPSSLENKR  180
KAADDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVIDA  240
LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVPNGMR TEAFEAYRGL  300
FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLFEDD  360
GMPFQVPEFV DTHTHFMGLI FGKN
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545