PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01424.1.g00160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 366aa    MW: 39858.2 Da    PI: 5.3042
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01424.1.g00160.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.4e-50161521128
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkya........ 69 
                                     l+pGfrFhPtdeelv++yL++++ g++l++ ++i+evd+y++ePwdLp+  ++++++++wyfF++ d+k +        
  Zmw_sc01424.1.g00160.1.am.mkhc  16 LAPGFRFHPTDEELVSYYLRRRILGRRLRV-DAIAEVDLYRLEPWDLPAlsSIRSRDNQWYFFTRLDRKITgagaggrg 93 
                                     579***************************.99***************4458888999***********9977777766 PP

                             NAM  70 .tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                       g+r+nrat++gyWk+tgkd+ev++ +g+lvg+kktLvf++grapkg +t+Wvmheyrl
  Zmw_sc01424.1.g00160.1.am.mkhc  94 gPGNRTNRATQQGYWKTTGKDREVYH-RGKLVGMKKTLVFHNGRAPKGARTNWVMHEYRL 152
                                     5567**********************.999****************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-5312158IPR003441NAC domain
PROSITE profilePS5100550.88816172IPR003441NAC domain
PfamPF023657.2E-2818152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MSNLSPLDSS PAEVRLAPGF RFHPTDEELV SYYLRRRILG RRLRVDAIAE VDLYRLEPWD  60
LPALSSIRSR DNQWYFFTRL DRKITGAGAG GRGGPGNRTN RATQQGYWKT TGKDREVYHR  120
GKLVGMKKTL VFHNGRAPKG ARTNWVMHEY RLIDADGPQN GAQYGAPYME EEWEDDDDAV  180
EKGAAIGASA NVAATSNAAD EESNEEEENG YSKASELAQG DYEDNSTFDG ISKTSVANGH  240
SGASSSCFHE DQYPENAVQA DKPLGKLASM LGSIPAAPAF ASEDPPAARK SLLTGVNPSS  300
IRVTAGIVQL GGLNFTASEH RPLQKNGDFS LLLSFTMESN VASKSLSFEP DTQVGAIPMV  360
MRGGLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-441215211140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003570443.15e-89NAC domain-containing protein 78
TrEMBLA0A0D9VMU55e-99A0A0D9VMU5_9ORYZ; Uncharacterized protein
STRINGLPERR02G31180.11e-100(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129312833