PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01401.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 592aa    MW: 63421 Da    PI: 9.4066
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01401.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-174795355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zmw_sc01401.1.g00030.1.am.mk 47 YRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 95
                                  9****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.24E-2046103IPR016177DNA-binding domain
PROSITE profilePS5103222.99846103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-3146103IPR001471AP2/ERF domain
SMARTSM003809.9E-3646109IPR001471AP2/ERF domain
PfamPF008472.5E-114795IPR001471AP2/ERF domain
CDDcd000181.67E-2847103No hitNo description
PRINTSPR003674.9E-104758IPR001471AP2/ERF domain
PRINTSPR003674.9E-106985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MDDAHKPASP TSASCTSSSS SSSSSSLVGA APKKRPRDRE DLGHLTYRGV RMRSWGKWVS  60
EIREPRKKSR IWLGTFATAE MAARAHDVAA LAIKGRAAHL NFPGQAHLLP RPASAAPKDV  120
QAAAALAAAA ADFPSDANAK SPESSSSSSS DDASVSFPPP PPPLQREDAL PDPDESLFDL  180
PDLLFDLRCG PSSCGASWAV DDDVAGGAAF RLEEPLMKKK RKEKGHHITR LPSHGRGFER  240
EGHPVSLSLS DSEQTPPPAH HTTQQERSYN LPTPLDQTSS SAGDVRRGRV ERVVVAADRS  300
ANRALKGRES DGCRSSDAPL RSLARRAAGF HAPWPPCRPL RTPRAHENGR KPTPRVACRL  360
AFVHGTLCPS PLCADAMLPG EDTRRGKLLF RSPQGQDDDD SWRLRDPDWP QPRLPRTETQ  420
SDREIAASSI PIGLLTRGYR NLIAAGRNLA NPNAGKITLT HAAATDLPGR SVSWSAGHSC  480
ADDGVKNCVL APPAGHCCGS PGVLRLVTSV TCWAKPLSEV SPTKSTRQAE TRQTDARAPG  540
WRACASQSWW YGDTDHVVRA LHTAGFGRTR PALEHSYASA VPVPGAGTLT SI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-16441081277Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354