PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01253.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 249aa    MW: 27527.4 Da    PI: 10.402
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01253.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.9e-13120163346
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                   e +r rrk++NRe+ArrsR+RK++ ++ L   v +L+ +Nk+L 
  Zmw_sc01253.1.g00020.1.am.mk 120 ENRRKRRKESNRESARRSRLRKQQHLDGLNSQVNQLTDQNKQLG 163
                                   5689*************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.5E-11115163No hitNo description
SMARTSM003381.3E-12118182IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749120162IPR004827Basic-leucine zipper domain
PfamPF001701.0E-10120162IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-10122171No hitNo description
CDDcd147022.64E-17123171No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLPREPWLLT CVAAARSTHN ASLPPRGKQQ RTAHVSFFCA ILLSLREPGS SKRFSLCDFF  60
FLKFMLLLAL SEHLLLGGSS MIGSSITRLV QSFSVVFLHC LGTGSSRSSE DGVNLQAQME  120
NRRKRRKESN RESARRSRLR KQQHLDGLNS QVNQLTDQNK QLGVALRVTS QNLVAVQAQN  180
SVLQTQKLEL ESRLGSLADF LLCLNPGTTA STGSAANSAV MNDSLMTTTS GACTWSQPVD  240
LYHHHHQCF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127RKRRKE
2134140RRSRLRK
3134141RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577967.12e-50bZIP transcription factor 44
TrEMBLA0A0A9GYA31e-52A0A0A9GYA3_ARUDO; Uncharacterized protein
STRINGPavir.Ba02250.1.p3e-52(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276