PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01162.1.g00120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 475aa    MW: 50941.8 Da    PI: 12.0044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01162.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18111160255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+WvAeIr+p++   r r +lg+f tae+Aa+a+++a++ l+g
  Zmw_sc01162.1.g00120.1.am.mk 111 RYRGVRQRS-WGKWVAEIREPRK---RSRKWLGTFTTAEDAARAYDRAALLLYG 160
                                   59****999.**********954...5**********************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-37111174IPR001471AP2/ERF domain
PfamPF008477.7E-12111159IPR001471AP2/ERF domain
PROSITE profilePS5103222.445111168IPR001471AP2/ERF domain
CDDcd000181.99E-16111166No hitNo description
SuperFamilySSF541711.57E-20111168IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.5E-29112167IPR001471AP2/ERF domain
PRINTSPR003675.7E-10112123IPR001471AP2/ERF domain
PRINTSPR003675.7E-10134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
LHAHACSLHC TFSLSLSLRP LYLTTAPLHQ AHPPRPPPPS LARSPQRKAQ HHHPSLSLSS  60
PSLSPFTHIP APLPRPMEPN SQQLPAATAA ESSGGGGSRS RKGGPENGNF RYRGVRQRSW  120
GKWVAEIREP RKRSRKWLGT FTTAEDAARA YDRAALLLYG PRAHLNLTAP PPELLASAQR  180
ASSNAHSSTS APPPLRPILP RPAAASTNQR SPAAFQHHHH HQQQVQLHLL APQLPAQLPP  240
PLYYASTATA STVTTTAQPQ EPAVAPLSMA PLASASVTEE QALTPDEAAA AAGKQSSGSC  300
RRERGASRTG KAAERATERL PTYSVLHPDG SIQVMDNRRA GRAGNDCGTT RRALGTCTQR  360
RDRPIGQGVV RSSLHCTGGN RDVEHKNAAR RAGTNQRPRM ATRGGRARDD GRNRSRTRET  420
QRRARRVTAP AAATTTAAAS GTGHSEGREN ARNPAQTASQ EPTNARTNHL TSLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-16112167662ATERF1
3gcc_A2e-16112167662ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133032632