PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01099.1.g00060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 996aa    MW: 108062 Da    PI: 11.0819
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01099.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-17808857255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zmw_sc01099.1.g00060.1.am.mk 808 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 857
                                   69****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.200.200.001233No hitNo description
SuperFamilySSF561122.6E-5246IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.730.101.4E-31808866IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-21808866IPR016177DNA-binding domain
PfamPF008471.4E-11808857IPR001471AP2/ERF domain
SMARTSM003806.2E-36808871IPR001471AP2/ERF domain
PROSITE profilePS5103223.393808865IPR001471AP2/ERF domain
PRINTSPR003671.3E-9809820IPR001471AP2/ERF domain
CDDcd000184.88E-28809867No hitNo description
PRINTSPR003671.3E-9831847IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 996 aa     Download sequence    Send to blast
LAELGTVGHA RHPNLCALLG CCVDCDLYLV FEFSCRGSVY ANLQVHRTRG VAADGVGRRG  60
VAAPRLPQAS VPPAAGDLDG SGEGDGVGRW RCKGAPRAAE LWARLSARIR RAALRGLRWA  120
AHLDGCTTPR PGSERPAGPW ALARAIGRDT QQAPVRQPCE YGVHQRIQLC HFVERATGVA  180
HTSRAEQRAD TKTCRRRPLQ VEMSQSYLRA PRARRCMNAF LEKPARHRRD FSTSRCLFFF  240
PALSVSWGAA IVVRRRGLYG TVVPVVFIEE RTPGKVKTCR PEKGVLTATL VWSCSKTRNN  300
QPCYDAATLL QRGRRSTASE SLRTKRRRRE KATLAITAPA RDGERGRRRQ WPADAGIAHH  360
DARRRAAGRA RERARNVPGA HGEQARRQGT GGRYSRHMPP STHPDPSVPW RSAAVTRTGA  420
PGTGRQPRCV NQRVALDMSW PWRRRPVSFS LFPPNVPSPR KSRSRVKPKR HGVVGTATRA  480
PPRMPHPTKR VPGRVTHTLL GVSPSTGPGR TAATRAPAGE HRERACRLDR VELTKQERQD  540
LPRMWRYLAS RDRSPAVLIK YAVSGNPMTP PPKVPIMDAL SAAKIQGNGR GGRSQGVQWA  600
KQIHVPQSAG DVLSRPYALL RRTCMLAGPR FATCATVAQH IIDLSGVPLA GCGELHGRCL  660
AGLGMCCVSP ARLQGTEHRG VQQPTVSPGP ISTHTPLVLP HHPLILVLAL RTAREVVMVQ  720
ELQETSSSSS ATTSSCTACS TASCSSTVTD SSSSPASPAE ANATPAPRKR QAAEAEAETG  780
GENEEEEGCA VKAMAKKRKR SSEGKHPTYR GVRMRAWGKW VSEIREPRKK SRIWLGTFPT  840
AEMAARAHDV AALAIKGRAA HLNFPDLTGV LPRAASAAPK DVQAAAALAA AFTTDPETAA  900
TTAPCHPQQE PANNKAAAQV DSAAEETLPA PPPAASTLAT PSSSSVVEDE RQLFDLPDLL  960
LDIRDGFGCF PAMWAPLPDV EEVNAELRLE EPLLWE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-15800865672Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325330RRRREK
2795800KKRKRS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6559422