PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01056.1.g00130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 280aa    MW: 29621 Da    PI: 6.5251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01056.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-19130180255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++ ae+Aa a+++a+ +++g
  Zmw_sc01056.1.g00130.1.am.mk 130 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDNAEDAAVAYDRAAYRMRG 180
                                   8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.45E-28129188No hitNo description
Gene3DG3DSA:3.30.730.103.4E-31129188IPR001471AP2/ERF domain
SMARTSM003801.1E-36130194IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23130190IPR016177DNA-binding domain
PROSITE profilePS5103223.749130188IPR001471AP2/ERF domain
PfamPF008474.1E-12130180IPR001471AP2/ERF domain
PRINTSPR003675.4E-13131142IPR001471AP2/ERF domain
PRINTSPR003675.4E-13170190IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MLRDPASETA ALDGIRHHHL DEPAPSAAPR PVYCRSTSFS SLVADQWSES LPFRPDDADD  60
MVVFGALRDA FSRGWLPDGS FAAVKPEPVA SPDSYDGSCI GSLLASSEEE PETPTPRREE  120
AAGAVSRGKH YRGVRQRPWG KFAAEIRDPA KNGARVWLGT YDNAEDAAVA YDRAAYRMRG  180
SRALLNFPLR IGSEIAAAAA AAATATAVGD KRPCPEPASS DSSPSSSSSG SPKRRKRGEA  240
AAASMAMALI PPAQPAQAPV QLNLPAQPWF AAGPVQQLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-38126193168ATERF1
3gcc_A5e-38126193168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953322.11e-128ethylene-responsive transcription factor 2
SwissprotQ404792e-54ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A1E5VV411e-130A0A1E5VV41_9POAL; Uncharacterized protein
STRINGSi017941m1e-127(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]