PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01051.1.g00160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1051aa    MW: 111816 Da    PI: 10.1455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01051.1.g00160.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19835885155
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa+ ++ a+ +l+g
  Zmw_sc01051.1.g00160.1.am.mk 835 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDSAAIQLRG 885
                                   69********.**********88.....55*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.89E-28835892No hitNo description
PfamPF008476.8E-12835885IPR001471AP2/ERF domain
SMARTSM003809.0E-34836899IPR001471AP2/ERF domain
PROSITE profilePS5103223.196836893IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-29836893IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-21836893IPR016177DNA-binding domain
PRINTSPR003671.9E-9837848IPR001471AP2/ERF domain
PRINTSPR003671.9E-9859875IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1051 aa     Download sequence    Send to blast
MVNTTTTECG LLVAEASTDW STVTVVETST TRRVLATMVE ASTNRKVLVM DVTENSTNRK  60
DEHYHAVNYS ACVQAWMESS LLLLHAAFRE WASKRQHEQG KDRGGGTEAG GSTRFVKAGC  120
CTDEQCHPYG LSSKLYTPTV HARGRRAKPL AAGCSACESE GACRTASCPN RQNFLSSDVS  180
PDPAHVYGVD GHRARDLPRR AHTGCSRAGK IHRCAVPSPS RGWQEEPAGR RYGDLTVPAG  240
RYRARMHATG ARRRSSYAPA GCPSERGEIS TGPVQALSTQ RRSDAGAPPD ALTGRLGGGA  300
LLPSGAFAPD RPPSRAAPPP SSRAPMAARG GGGATTRHVT IGSAPPCPTV GTPPMDGQRP  360
SFPHEWSVVR GRRERTAPSI RWHYAAVKRP MRRGAQSERD LRCAHAKSSE DCATSQKVRA  420
GSSLTHARPS ISAATCPDYC SHADTVPAKR APGLHTPQGR AGWWSLRPPL RRSPQWLNKT  480
TARGHRGIGR GRQPRLVGDP IRRVDSGNHS PTFVFRSPQK TYPNPQNHPI EPVAHQSPAS  540
TPHVAARLPS VLRSQGLLLV FLHATQLLPP RFGGSVSCSS RSLRSISFRS DSSWYRSKYC  600
SRRHLSPRSE SCFSQSSKTV KVPAGGAAAA AAAPAVAASV RTRQRRGRAR LYCLPFVSLL  660
LCSSCSRSPA AFLFSFLKKV NRSSLLRPLL RSPAALACSP APLASLLPSF GLYSPADPQS  720
RTEGIHPSIT SLLVLAMSRS RTVRIFWDDP DVTDSSGDED AYGARKVGRL VRELPRVEAA  780
AAAAAAAAAG GMLEQSSAGD GERGRRPAAG GLGGCSGGAR RRLGSKGAGS VAPGTKFRGV  840
RRRPWGKYAA EIRDPWRGVR VWLGTFDTAE EAARVYDSAA IQLRGPNATT NFSSAAAADS  900
GGSGGGHQDQ VTAGYESGTE SSPAVSSPTS VLRKVPSLSS LAEDKDESDA ATGEPAAEGS  960
LAALEELGEF VPFEDAPVYA SSSGFWDFEP DAAGFLYAEP SSPETAWDVA AATTSASSGD  1020
ASWPAPSVHQ ENDYFQDLRD LFPLNPLPAI F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-20827892571Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1386392VKRPMRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697