PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01035.1.g00180.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 399aa    MW: 40559.7 Da    PI: 9.2219
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01035.1.g00180.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1332.8e-41622362136
                           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 
                                   ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss
  Zmw_sc01035.1.g00180.1.am.mk  62 PPKRSSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSS 142
                                   689******************************************************************999877777777 PP

                           TCP  82 asnsssg....................................kaaksaakskksqksaasalnlakesrakarar..are 124
                                   +s+ s++                                    ++++s  +   + +s +  l+++ + +a a a   +r+
  Zmw_sc01035.1.g00180.1.am.mk 143 GSSFSAPahlraalpspssavrfgradawdrvvglgfpsegpaSSSSSPSPLLLNFHSGSVGLDVQPSPSAAAAAAdiSRK 223
                                   775555577788888889999999999999999999999999655555558888888888889999866655555546666 PP

                           TCP 125 .rtrekmriknkl 136
                                    r++++ ++++++
  Zmw_sc01035.1.g00180.1.am.mk 224 rRWEQEIQQQQQQ 236
                                   5566555555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.4E-4367237IPR005333Transcription factor, TCP
PROSITE profilePS5136927.86168122IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MDVAGDGGGG RRPNFPLQLL EKKEEQPCSS SAAVGASAGG GNGNGSGAPC GPGGEVQVRK  60
TPPKRSSTKD RHTKVEGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW LLQQAEPAVI  120
AATGTGTIPA NFTSLNISLR SSGSSFSAPA HLRAALPSPS SAVRFGRADA WDRVVGLGFP  180
SEGPASSSSS PSPLLLNFHS GSVGLDVQPS PSAAAAAADI SRKRRWEQEI QQQQQQQQYQ  240
QQMAGYTQSQ MPGTVWMVPS NNTQGGTPSS GGGSGGNGGG SGESIWTFPQ MSSAAAAAAM  300
YRGNVPSGLH FMNFPAAPMA LLPGQQLGLG PVGGSGGGGD GGGGEGHMGI LTALNAYRTQ  360
TATDSAAAQQ GDGGGRGSGQ QQHGGGRGER HESMSTSDS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved the regulation of plant development. Together with TCP15, modulates plant stature by promoting cell division in young internodes. Represses cell proliferation in leaf and floral tissues (PubMed:21668538). Together with TCP15, acts downstream of gibberellin (GA), and the stratification pathways that promote seed germination. Involved in the control of cell proliferation at the root apical meristem (RAM) by regulating the activity of CYCB1-1 (PubMed:25655823). Involved in the regulation of seed germination. May regulate the activation of embryonic growth potential during seed germination (PubMed:17953649, PubMed:22155632). Acts together with SPY to promote cytokinin responses that affect leaf shape and trichome development in flowers (PubMed:22267487). Transcription factor involved in the regulation of endoreduplication. Represses endoreduplication by activating the gene expression of the key cell-cycle regulators RBR1 and CYCA2-3 (PubMed:25757472). Regulates the expression of the defense gene pathogenesis-related protein 2 (PR2) in antagonism to SRFR1, a negative regulator of effector-triggered immunity (PubMed:24689742). Involved in positive regulation of plant defense. Represses jasmonate (JA) response to promote disease resistance. Regulates the plant immune system by transcriptionally repressing a subset of JA-responsive genes (PubMed:28132837). {ECO:0000269|PubMed:17953649, ECO:0000269|PubMed:21668538, ECO:0000269|PubMed:22155632, ECO:0000269|PubMed:22267487, ECO:0000269|PubMed:24689742, ECO:0000269|PubMed:25655823, ECO:0000269|PubMed:25757472, ECO:0000269|PubMed:28132837}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during seed imbibition (PubMed:17953649). Circadian-regulation with the lowest expression in the middle of the dark period (PubMed:17953649). {ECO:0000269|PubMed:17953649}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825808.11e-161transcription factor TCP14-like
SwissprotQ93Z006e-55TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A2S3GSV01e-160A0A2S3GSV0_9POAL; Uncharacterized protein
STRINGPavir.J14065.1.p1e-160(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Publications ? help Back to Top
  1. Steiner E, et al.
    The Putative O-Linked N-Acetylglucosamine Transferase SPINDLY Inhibits Class I TCP Proteolysis to Promote Sensitivity to Cytokinin.
    Plant Physiol., 2016. 171(2): p. 1485-94
    [PMID:27208284]
  2. Yang L, et al.
    Pseudomonas syringae Type III Effector HopBB1 Promotes Host Transcriptional Repressor Degradation to Regulate Phytohormone Responses and Virulence.
    Cell Host Microbe, 2017. 21(2): p. 156-168
    [PMID:28132837]
  3. Zhang N, et al.
    MOS1 functions closely with TCP transcription factors to modulate immunity and cell cycle in Arabidopsis.
    Plant J., 2018. 93(1): p. 66-78
    [PMID:29086441]
  4. Mazur MJ, et al.
    Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
    Front Plant Sci, 2017. 8: p. 2043
    [PMID:29250092]