PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00883.1.g00300.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 378aa    MW: 40864.4 Da    PI: 4.5597
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00883.1.g00300.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.00011216236727
                                     HHHHHHHHHHHHHHHHHHCTS CS
                             HLH   7 erErrRRdriNsafeeLrell 27 
                                     ++ErrRR+r+N++++ Lr+++
  Zmw_sc00883.1.g00300.1.am.mkhc 216 MAERRRRKRLNDRLSMLRSIM 236
                                     79****************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.362209259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-11214279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-6215258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-7216266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
PTAVFGPQVA SVPVPLAVIP PVSPTRCHWP LQLGHVRSEL IMELDEETFL DELVSLRREA  60
AAAAPWQAYP GAGSGGVMMS DLLFYGGEGA GTSSGMDLSP FQELPPMAPV PVPPPLPPHP  120
HEEFNFDCLS EVCNPYRSSV AVPGEAVAVG QSLAPLQDAA LMVEETCGDM GQQYGGGASP  180
TFVFGGQSSE MANIRAYSGS AHHRSKMHGA PSKNLMAERR RRKRLNDRLS MLRSIMDRIS  240
ILGDTIDYVK ELTERIKVLE DEMGSSLEDL DLLNTLNDSS DNNNDMIVRN STKFDVEKRS  300
NGSTRIEICC PANPGVLLST VSALEVLGLE MEQCVVSCFS DFGMQASCLQ EDGKRQVIST  360
DEIKQALFRS AGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217224ERRRRKRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985797.11e-173transcription factor bHLH61
TrEMBLK4AC631e-172K4AC63_SETIT; Uncharacterized protein
STRINGSi036470m1e-173(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP13023799