PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00754.1.g00240.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 251aa    MW: 27539.2 Da    PI: 10.615
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00754.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.44.8e-16174220552
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                                   +r++r++kNRe+A rsR+RK+a++ eLe+k++ Le+eN++L+ +l++l
  Zmw_sc00754.1.g00240.1.am.mk 174 RRQKRMIKNRESAARSRARKQAYTNELENKIARLEEENERLR-KLKML 220
                                   79****************************************.67766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-14168216No hitNo description
SMARTSM003386.8E-9170225IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.438172216IPR004827Basic-leucine zipper domain
PfamPF001703.5E-13174216IPR004827Basic-leucine zipper domain
CDDcd147071.77E-21174218No hitNo description
SuperFamilySSF579593.5E-11174216No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MASLGGGRSG GSPLSRQGSV YRLTLTEVES QLGEPLRSMN LDDLLRTVLP AAEPATAGKK  60
TVDEVWRDIQ SASSVRHPTM GEMTLEDFLS RAGVAVEGGA GCAGLHWLHQ HQPPQHHRHA  120
PLPRPLGVGA ATSLTVYRDA LGDGVGGFLS QVGGRKRGAA AAGVDGVVER TVERRQKRMI  180
KNRESAARSR ARKQAYTNEL ENKIARLEEE NERLRKLKML EPLEPPPEQE RRPVAELEPK  240
KQLRRTNSAR F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154176RKRGAAAAGVDGVVERTVERRQK
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183813.11e-104ABSCISIC ACID-INSENSITIVE 5-like protein 3
SwissprotQ9C5Q21e-56AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A1E5UQI41e-107A0A1E5UQI4_9POAL; Uncharacterized protein
STRINGONIVA07G26520.16e-92(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]