PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00698.1.g00100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 515aa    MW: 55107.8 Da    PI: 4.3474
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00698.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-1960109255
                           AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Zmw_sc00698.1.g00100.1.sm.mk  60 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 109
                                   789******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.55960117IPR001471AP2/ERF domain
PfamPF008471.4E-1360109IPR001471AP2/ERF domain
SMARTSM003804.0E-3560123IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-1960117IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.1E-2760116IPR001471AP2/ERF domain
CDDcd000181.56E-2861116No hitNo description
PRINTSPR003678.9E-86172IPR001471AP2/ERF domain
PRINTSPR003678.9E-88399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MARKRKAFDA LGDIDGGEDA LNPPPSLVST MDACTWSSGG SMVAAVAVAA RQQQQRGRKR  60
FVGVRQRPSG RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFWPRP  120
SQAVAAHPVA PPAHVPTTPA LPPKVTNLLL LRLRARNQQL LNATAAQQEA AMLPRGQSCH  180
EAYGGDGEEC GFQVDDYLSH DCGSDGTGSS LEMEDEEAEE EEEELDFQFM DAHVASPAAT  240
GIECSPFEVV AAELGSSVVD AEDGEPATAV QELIRRIDYE RKVSASLYAL NGVSECLKMR  300
LGSTSAGAAM RDQLSGLREA CRKKQHEAVP AQQQHQEQEP AAETAVDREA GQEAYSGSDG  360
GGDMEVVRAS PSEASGVEDG DVLWSSLDLA PIYPLYSGNY QQIEALASEC LDQAFGEQVQ  420
MLPAEDHGPA PTDRSDSALY LRRTEETDAE PVERARGETL GRCVGVSGED SAGEVRAELL  480
HGAHGAPEHA LAATTIVRVG VEESRGPRGI TAEAE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809285.11e-128ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1E5WFR21e-145A0A1E5WFR2_9POAL; Uncharacterized protein
STRINGPavir.Cb00448.1.p1e-127(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052