PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00622.1.g00110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 487aa    MW: 51705.7 Da    PI: 9.3133
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00622.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP107.62e-33261356889
                           TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsss 87 
                                   ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a  +c+++ s s+as   s
  Zmw_sc00622.1.g00110.1.am.mk 261 SKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvFSCSSAPSTSAAS---S 338
                                   79********************************************************8888844442222222222...1 PP

                           TCP  88 g................k 89 
                                                    +
  Zmw_sc00622.1.g00110.1.am.mk 339 FllgkrprqdvvvaheaA 356
                                   122223333344443331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.2E-30260359IPR005333Transcription factor, TCP
PROSITE profilePS5136926.808261315IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MHLRTTGGVD LLSTDAAHGA VDTRPWSPTI PVQPVHLAST ATSPGAGRTT PAGGQWSRLG  60
STCFKHAASG QANEPSILPM IQPRTQSGLH ARLQLHRSAI ATGSQPHTVV YCHCSLRRFL  120
QLVPPQQQGP VYPLLDNRRG ATCRRHNKVR AADRTQRPMC PVPLYAQCCA ACPSPLSLIS  180
SDARRPGTCA ARQDPYPYPS IPITATPQPS CPPTHSTPRT TKAMASRDDA AATFHVYGAL  240
PAAASTDAVT PAAKKPPSAG SKDRHSKVNG RGRRVRMPIV CAARVFQLTR ELGLKSDGQT  300
IEWLLRQAEP SILAATGSGT TPAVFSCSSA PSTSAASSFL LGKRPRQDVV VAHEAAAAPQ  360
PPFWAALQAR PVAWGLSPAQ EQQAYASVAQ GHHLNLLSVL SSATRPAEES SRDAGKVVPN  420
SFDVNGLICV LCILGECVHT HMLNQEHEWM VHLSLISGEA EAERSGRRHD LSSRESDPPG  480
CGLVAAS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100