PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00622.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TCP
Protein Properties Length: 532aa    MW: 57988.7 Da    PI: 10.41
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00622.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP107.81.7e-33285392889
                           TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsss 87 
                                   ++++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a  +c+++ s s+as   s
  Zmw_sc00622.1.g00070.1.am.mk 285 SKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvFSCSSAPSTSAAS---S 362
                                   79********************************************************8888844442222222222...1 PP

                           TCP  88 g............................k 89 
                                                                +
  Zmw_sc00622.1.g00070.1.am.mk 363 FllgkrprqdvvvaheaaaapqppfwaalQ 392
                                   122233333444444444444555555540 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.8E-30284384IPR005333Transcription factor, TCP
PROSITE profilePS5136926.808285339IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MERSTPGHGP LPFPSSQYIW RFDRAGEHGD EPRSRTNNTR GRAVVQAGLN CIKHAASGQA  60
NEPSILPMIQ PRPQSGLHAR LQLHRSAIAT GSQPHTVVYC HCSLRRFLQR VPPQQQGPVY  120
PLLDNRRGAT CRRRRFRAKV TPVSSVAIHK HRCRTKGQVD FNPESASLRH NKVRAADRTQ  180
RPMCPVPLYA QCCTACLSPR SLISSDARRP GTCAARQDPY PYPSIPITAT PQPSCPPTHS  240
TPRTTKAMAS RDAAATTFHV YGALPAAAST DAVTPAAKKP PSAGSKDRHS KVNGRGRRVR  300
MPIVCAARVF QLTRELGLKS DGQTIEWLLR QAEPSILAAT GSGTTPAVFS CSSAPSTSAA  360
SSFLLGKRPR QDVVVAHEAA AAPQPPFWAA LQARPVAWGL SPAQEQQAYA SVAQGHHLNL  420
LSVLSSATRP AEEEYRGSTP SPRCCKTASD DIFSATAECM HTHMLNQEHE WMVHLSLISG  480
EAEAERSGRR HDLSSRESDP PGCGLVAASW VVAGAGPWIF HWLLRWSRET WQ
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100