PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00620.1.g00290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 372aa    MW: 39330.7 Da    PI: 4.8232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00620.1.g00290.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.24.9e-094885141
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaee 41
                                  + ++GVr++   grWv+e+r+p   g +  r +lg++   e 
  Zmw_sc00620.1.g00290.1.am.mk 48 PVFRGVRRRGAAGRWVCEVRVP---GrRGCRLWLGTYRR-EA 85
                                  579******************9...6445********76.55 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-54883IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-124987IPR001471AP2/ERF domain
SMARTSM003800.01749103IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-74986IPR016177DNA-binding domain
PROSITE profilePS5103214.38149250IPR001471AP2/ERF domain
SMARTSM003803.8E-4211256IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-9213252IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.4E-14215252IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MDMGLFHEQH SSSSSSSSEN NAAGLSSSPG PAKKRPAGRT KFRETRHPVF RGVRRRGAAG  60
RWVCEVRVPG RRGCRLWLGT YRREAASGTA AGAVNDEVTP SASTEPSAVG ISVSCFDATV  120
PADRCVLQVK ADEPAALNGF GIFDPDWFGD MDLDMYYANL AQALLLEPPP LGAWQHGDGT  180
DGTRTAQHLH AAAFPFPAKL STNLSLPAAL TRQHCTELWL GTFATPEAAA RAHDAAAIAV  240
SGRAACLNFA DSAWLLPPLL PPPGVMSSAR EVKGAVAEAI EALRRRSAET SDEENGCASR  300
PAVDDGGSSP AGKPSSDFAF EFDDGFMFGG MDDAESYYAS LAQGLPVEPP ATAASWEDCE  360
SGGTEMALWS YY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802908.11e-41dehydration-responsive element-binding protein 1B-like
SwissprotQ8GUW41e-28DRE1B_ORYSI; Dehydration-responsive element-binding protein 1B
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261