PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00569.1.g00420.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 276aa    MW: 29565.6 Da    PI: 6.1415
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00569.1.g00420.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.69.9e-22173235163
                                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                     e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
  Zmw_sc00569.1.g00420.1.sm.mkhc 173 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIRKEYEQLLSQN 235
                                     89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.1E-23189IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-999155No hitNo description
Gene3DG3DSA:1.20.5.1709.1E-17170234No hitNo description
SMARTSM003387.2E-21173237IPR004827Basic-leucine zipper domain
PfamPF001704.5E-20173235IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288175238IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.88E-11176233No hitNo description
CDDcd147023.73E-23178228No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MGSNDPGTPS KASKASEQDQ SPATTSGTTA LVYPDWTPFQ AYSAMPPHGF FPPPAAANSQ  60
AHPYMWGAQP MVPPYGTPPP PYVMYPPGTG AAPGAPEMNG SSQNGSSYSA SQGMVNQGMS  120
MLPIQPGAMV GVPGSTTNLN IGMDYWAASG SAAVPAMHSK APAGSARGDQ WDERELKKQK  180
RKQSNRESAR RSRLRKQAEC EELGQRAESL RSENSSLRAE LERIRKEYEQ LLSQNASLKE  240
RLGGTSNLVP DMNEQNDGDG SSKKQPDSDA QPEQEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189195RRSRLRK
2189196RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004952026.11e-154transcription factor HBP-1a
SwissprotP239225e-74HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLK3YTP11e-153K3YTP1_SETIT; Uncharacterized protein
STRINGSi017637m1e-154(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]
  2. Tabata T, et al.
    A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif.
    Science, 1989. 245(4921): p. 965-7
    [PMID:2772648]
  3. Mikami K, et al.
    Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants.
    Mol. Gen. Genet., 1995. 248(5): p. 573-82
    [PMID:7476857]
  4. Nakayama T,Okanami M,Meshi T,Iwabuchi M
    Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain.
    Mol. Gen. Genet., 1997. 253(5): p. 553-61
    [PMID:9065688]
  5. Okanami M,Meshi T,Tamai H,Iwabuchi M
    HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain.
    Genes Cells, 1996. 1(1): p. 87-99
    [PMID:9078369]