PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00523.1.g00290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 426aa    MW: 47167.7 Da    PI: 5.1482
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00523.1.g00290.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.62.5e-32772161128
                             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgk 72 
                                     lp G++F+P+d+el+ + ++k+ +        +e++   ++e  +i++++P++Lp  vk++ +  +fF+++ k+y+tg+
  Zmw_sc00523.1.g00290.1.sm.mkhc  77 LPSGVKFDPSDQELLLHLMAKHGKPGAkshpfIEEFIPtVEEEdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGT 154
                                     699************777766544333455443333333555546**********.677888899************** PP

                             NAM  73 rknratk.....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                     rk+r+++     + +W++tgk+k+vl  +g++ g+kk++v+y  + +  k+ekt+Wvmh+y+l
  Zmw_sc00523.1.g00290.1.sm.mkhc 155 RKRRKINtddlaDVRWHKTGKTKPVLI-DGKHLGCKKIMVLYmsSMKGGKAEKTNWVMHQYHL 216
                                     ****74444666899************.999***********5544777788*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3270221IPR003441NAC domain
PROSITE profilePS5100526.70877233IPR003441NAC domain
PfamPF023651.1E-1378216IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MDGVHQGFAA TPLDSLRSAS PGQLRFKLHL QQILTARVAT PPPPPPLRAL RNGPGSLRRR  60
GTLGGRDERV VQPWPGLPSG VKFDPSDQEL LLHLMAKHGK PGAKSHPFIE EFIPTVEEED  120
GICYTHPQKL PGVKQDGSVS HFFHRTFKAY NTGTRKRRKI NTDDLADVRW HKTGKTKPVL  180
IDGKHLGCKK IMVLYMSSMK GGKAEKTNWV MHQYHLGIGE DEKDGEYYKP GEKSAQELTT  240
MNGVESVDEA DIPDLLPLPS EEDIGTNKEA NGSPEHNPHQ VNSPHGISLE ENVAEETAAA  300
PPSEKPEDPA NYQSQDPKLW EGDSQFELLD TQQLAEGLAL CDEFLLSQSQ TSCGDGDEPK  360
VIKPRLAVYA QLPAEDFKKD LEECQRLGPS DNTNPELDSA NEFRLSQIEF SQDSFTTWAG  420
GKMVDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965197.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK21e-107NAC8_ARATH; NAC domain-containing protein 8
TrEMBLK3XXI10.0K3XXI1_SETIT; Uncharacterized protein
STRINGSi006639m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651