PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00496.1.g00490.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 404aa    MW: 44826.7 Da    PI: 4.322
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00496.1.g00490.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1448.2e-45101382128
                             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknrat 78 
                                     ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++++w+fFs+ d+ky++g+r++r+t
  Zmw_sc00496.1.g00490.1.am.mkhc  10 PPGFRFSPTDEELVLYFLKRRISSGRPTP--YIADVDVYKFHPSHLPErsALQTGDRQWFFFSRLDRKYPNGSRASRTT 86 
                                     8*********************9999555..6**************94357888999********************** PP

                             NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                      +gyWkatg+d+ v+s   +g+ vg kktLv+++grap+ge+tdWvm ey++
  Zmw_sc00496.1.g00490.1.am.mkhc  87 GDGYWKATGRDRFVCSGgsGGRSVGNKKTLVYHHGRAPRGERTDWVMYEYTI 138
                                     ***************98778889***************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-517161IPR003441NAC domain
PROSITE profilePS5100551.1959161IPR003441NAC domain
PfamPF023655.0E-2310138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MENSPPRRWP PGFRFSPTDE ELVLYFLKRR ISSGRPTPYI ADVDVYKFHP SHLPERSALQ  60
TGDRQWFFFS RLDRKYPNGS RASRTTGDGY WKATGRDRFV CSGGSGGRSV GNKKTLVYHH  120
GRAPRGERTD WVMYEYTILA DALPQAAGAR EAYALYKLFQ KSGVGPKNGE QYGAPFREED  180
WLDDDEEQDL PAGAVVHPVA TRPTTTNCAA TVEQQAEREL VGDLEELLSE FGNDQEQAEA  240
QLEFSNSVSS QSQLQHADGQ GCRSDCASKA QVVDASTGND ALPVADNTCT DLPLGDIEEL  300
LMRISDDQQN TEFFSDFSTS LPELQLQCDE YQAWLDSNKG ERIGAKDPTA SSGAVMTAEC  360
TSTELPVGDL EGLLLQIAND QEMVEPLLAL EIYVMVIQLV LFLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-411013816140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021310063.10.0NAC domain-containing protein 82 isoform X1
TrEMBLA0A1E5UTD40.0A0A1E5UTD4_9POAL; NAC domain-containing protein 16
STRINGPavir.J04800.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840