PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00386.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 171aa    MW: 18209 Da    PI: 10.6082
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00386.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-1191139250
                                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                     ke  r +r+ +NR++A+  R+RKka++ eLe kvk  e  N +L +++ 
  Zmw_sc00386.1.g00020.1.sm.mkhc  91 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKVKDVELRNAELEQRIL 139
                                     78899*************************************9998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-690154IPR004827Basic-leucine zipper domain
PfamPF001701.4E-891138IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.16292138IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-995138No hitNo description
CDDcd147045.50E-1295138No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-1295139No hitNo description
PROSITE patternPS00036097112IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MAAQEQEQEQ EKQQAKTSAT SSLPTSSERS SSSAPSNLRE EGGAKSDEEI RRVPEIGSGA  60
SASSGAGADE RAKEDGQPAA GKKRGRTAGD KEQNRLKRLL RNRVSAQQAR ERKKAYLTEL  120
EAKVKDVELR NAELEQRILK NTTAHAGKRA GGGSAGGKGG DGGKKHHFTK S
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002455099.12e-51transcription factor HY5 isoform X1
SwissprotQ9SM509e-32HY5_SOLLC; Transcription factor HY5
TrEMBLA0A3L6SQT47e-54A0A3L6SQT4_PANMI; Transcription factor
STRINGPavir.Eb00436.1.p1e-55(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]